Arabidopsis lyrata (lyrate rockcress): 9314003
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Entry
9314003 CDS
T01578
Name
(RefSeq) ATP-dependent RNA helicase DEAH12, chloroplastic
KO
K11975
E3 ubiquitin-protein ligase RNF144 [EC:
2.3.2.31
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9314003
Enzymes [BR:
aly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
9314003
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
9314003
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IBR
IBR_1
zf-RING_5
Rcat_RNF216
zf-RING_2
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
9314003
NCBI-ProteinID:
XP_002877935
UniProt:
D7LUL3
LinkDB
All DBs
Position
Unknown
AA seq
322 aa
AA seq
DB search
MATQSVNAVIVDLPGDVNDDGDNSDCFIFSSTPLSARGSTKRDAISVENYDRDRKLQRLW
VYPPHNRAIKSESPIYIDLDLYNDEDDDIRILCFPPPIHTKSLEKGQSSSSATVTFDCEI
CVETKSIIETFRIGGCSHFYCNDCVSKYIAAKLQDNILSIECPVSGCSGRLEPDQCRQIL
PREVFDRWGDALCEAVVMRSKRFYCPYKDCSALLFMDESEVMKDSECPHCHRMVCVECGT
KWHPEMTCEEFQKLAENERGRDDILLATMAKKKKWKRCPSCKFYIEKSHGCLYMKCRCGL
AFCYNCGTPSRDHSHYCYNCKR
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacagtctgttaacgcggtgatcgttgatcttcccggagatgtaaacgacgac
ggcgataattccgattgtttcattttctcctccactcctctatccgctcgtggttctacc
aagcgtgacgccatttccgttgagaattacgatcgtgatcgcaaacttcaacgtctctgg
gtctaccctcctcacaacagagcaatcaaatcagaatctccaatttacatagatcttgat
ctatacaacgatgaagacgatgatatcagaatcctctgtttcccaccaccaatccacacc
aaatctttagaaaagggtcagtcttcttcgtcagcgacggttactttcgactgtgagata
tgtgttgaaaccaaatccataattgaaacgtttcgtatcggtggatgctctcacttctac
tgcaacgattgtgtctcgaaatatatagcagctaaattacaagacaacatcctctcaatc
gagtgtcctgtctctggttgctctggtcggctcgagccagatcagtgtcgtcaaatcttg
ccaagagaggtttttgatcggtggggtgatgctttgtgtgaagcagtagtgatgcgttcg
aagagattctattgtccttacaaggattgctctgctttgcttttcatggacgagagtgaa
gtaatgaaagactcagagtgtcctcattgccatagaatggtgtgtgtagagtgtgggact
aagtggcatccggagatgacttgcgaggagtttcagaagctagcggagaacgaaagagga
agagatgatattttgcttgcgacgatggcaaagaaaaagaaatggaaaagatgtccttct
tgcaaattctatattgagaagtctcatggttgcttatacatgaagtgcaggtgtgggttg
gctttttgctacaactgtggaactccatcgagggaccattctcattattgttataattgt
aagcgttga
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integrated database retrieval system
