Arabidopsis lyrata (lyrate rockcress): 9314034
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Entry
9314034 CDS
T01578
Name
(RefSeq) TATA-binding protein-associated factor BTAF1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aly03021
]
9314034
Transcription machinery [BR:
aly03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
9314034
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
HEAT_EF3_N
TOR1L1_N
HEAT_ECM29
TPR_Trm732_C
HEAT_2
ResIII
TPR_TNPO3_IPO13_3rd
HEAT_GCN1
HEAT_Maestro
UTP20
Motif
Other DBs
NCBI-GeneID:
9314034
NCBI-ProteinID:
XP_020882447
LinkDB
All DBs
Position
Unknown
AA seq
2044 aa
AA seq
DB search
MAHQQSSRLNRLLTLLDTGSTQATRLTAAKQIGDIAKSHPQDLSSLLRKVLHHLRSKKWD
TRVAAAHAIGAIVLNVKHPSLSELLNSLATKLGEAGISDNVDEVVALRNLQSKILANAPF
RSFEMNKVLEFGALLASGGQEYDILNDNSKNPKDRVARQKKNLRRRLGLDMCEQFMDVNE
MIRDEDLIEQKSNVPANGVGNRLYANYSPHHIQQFVSRMVPRVNSRRPSARELNLLKRKA
KISSKDQAKGSCEVADVEMPSSHASTSKRISSDSLDSDKADIGNEDDIEPDGDGKWPFHS
FVEQLILDMFDPAWEIRHGSVMALREILMLHGGSAGVSTEEFSSDNGFELKEVLNKVTRE
REIDLNMQVSEHELEPLRKRPKIEDPSKSFIDNTVLEVIGGYSDINVKDEDAEFLLPPVK
VNGQTDSNSTKVEPQSSMDDSSSHSEINHVAEVNNHFEDKSFVEEAVIPKHQEENLEVLD
LVKQARHSWIKNFEFLQDCTIRFLCVLSLDRFGDYISDQVVAPVREACAQALGATFKYMN
PSVIYETLNILLQMQRRPEWEIRHGSLLGIKYLVAVRQEMLQDLLGYILPACKAGLEDSD
DDVRAVAADALIPAAAAIVSLRGQTLLSIVMLLWDILLELDDLSPSTSSVMNLLAEIYSQ
DDMTLVMHEELSLGEEQNIDLNEMGHIESIGERRDVKESPYALSGLAPRLWPFTRHDITS
VRFSAIRTLERLLEAGCRKNISEQSKSSFWPSSILGDTLRIVFQNLLLESTEEILECSER
VWRLLVQCPVDDLEDAAKFYMASWIELAATPYGSTLDATKMFWPVAPPRKSHFKAAAKMK
AVKLENEASSIMGFDCARSSASLEKHEDVSARSTKIIVGSDMEMSVTRTRVVTASALGIF
ASRLREGSMQFVVDPLSSTLTSLSGVQRQVASIVLISWFRETKFKAPTDGSGSLPGFPSP
LKKWLLDLLACSDPAFPTKDILLPYAELSRTYTKMRNETSQLLHTVETCHCFDKLLSTNK
LNVESVTADETIDFASTLALWNKESVGNESLEKQVFEDVESSRQQLLSTAGYLKCVQSNL
HITVTSLIAAAVVWMSEFPARLNPIILPLMASIKREQEQILQQIAAEALAELIAYCVDRK
PSPNDKLIKNICSLTCMDPSETPQASIICSMDIIDDMDFLSSRSNAGKQKAKVVLAGGED
RSKVEGFITRRGSELALKHLSLKFGGSLFDKLPKLWECLTEVLVPEIPADQQNIDLKIES
ISDPQVLINNIQVVRSIAPVMEETLKPRLLSLLPCIFKCVRHSHVAVRLAASRCVMTMAK
SMTTNVMAAVVEGAIPMLGDLTCINARQGAGMLIGLLVQGLGVELVPYAPLLVVPLLRCM
SDVDSSVRQSVTRSFAALVPMLPLARGVPPPVGLSKDLSSNAEDAKFLEQLLDNSHIDDY
KLCTELKVQLRRYQQEGINWLGFLKRFKLHGILCDDMGLGKTLQASAIVASDAAERRGST
DEPDVFPSIIVCPSTLVGHWAFEIEKYIDLSLLSVLQYVGSVQDRVSLREQFNNHNVIIT
SYDVVRKDVDYLTQFSWNYCILDEGHIIKNAKSKITSAVKQLKAQHRLILSGTPIQNNIM
ELWSLFDFLMPGFLGTERQFQASYGKPLLAARDPKCSAKDAEAGVLAMEALHKQVMPFLL
RRTKEEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSGAKQEISSIIKVDGSADSGNADV
APTKASTHVFQALQYLLKLCSHPLLVLGDKVTEPVASDLSAMINGCSDIITELHKVQHSP
KLVALQEILEECGIGSDASSSDGTLSVGQHRVLIFAQHKALLDIIEKDLFQTHMKSVTYM
RLDGSVVPEKRFEIVKAFNSDPTIDVLLLTTHVGGLGLNLTSADTLVFMEHDWNPMRDHQ
AMDRAHRLGQKRVVNVHRLIMRGTLEEKVMSLQRFKVSVANTVINAENASMKTMNTDQLL
DLFASAETSKKGGASSKNGSEDNDQIAGTGKGLKAILGNLEELWDQSQYTEEYNLSQFLA
KLNG
NT seq
6135 nt
NT seq
+upstream
nt +downstream
nt
atggcacatcaacaatcttcccgactcaatcgtctccttactttgttggacactggttca
actcaagctactcggctaactgcagccaagcagatcggggatattgcaaagtctcatcct
caggacttgagctctcttttgagaaaggttttgcatcacctccgtagtaaaaagtgggat
acgagggttgctgctgctcatgctattggtgcgattgttctgaatgtcaaacatccttca
ttgagtgaactgttaaattctttagcaacgaagttgggtgaggccgggatatctgataat
gtagatgaagtggtggctttgcgcaatcttcagtccaagattctggcaaatgcacccttt
agaagctttgagatgaataaggttttagagtttggcgctttgttggcatctggtggacag
gagtacgacattttgaatgacaattccaagaatccaaaggatcgagtggctcgtcagaaa
aagaatctccgacgacgtctaggtttggacatgtgcgagcagttcatggatgttaatgaa
atgattagggatgaggatcttattgaacagaagtccaatgttcctgcgaatggggttggg
aacagattatacgcaaactattctccacatcatattcaacaattcgtttcaaggatggtt
ccccgtgtcaattctaggaggccaagcgcaagggaattgaatttactgaaacgaaaagca
aaaataagctcaaaagatcaagctaaaggtagctgcgaagtagcagatgttgagatgcca
tcgtctcatgcctcaacctcaaaaagaatatcgtccgactcattggactcggacaaggcg
gacattggtaatgaggatgatatcgagcctgatggggatggaaaatggcctttccatagt
tttgttgagcaacttattcttgacatgtttgaccctgcatgggagatccgccatggaagt
gtaatggctctcagagaaatattaatgcttcatggtggttctgctggagtgtcaacagaa
gagtttagctcagataatgggtttgagttgaaagaagtcttgaacaaagtaacacgagaa
agagaaatcgacttaaatatgcaggtttcagaacatgagctggagccacttcggaaaaga
cctaagattgaagatccatcaaaatcatttattgataacactgttttagaagttattggg
ggttactctgatattaatgttaaagatgaagatgctgagtttttactgccaccagtgaag
gtcaatggtcaaactgactctaattctacgaaagtggaacctcaatcttctatggatgat
tcgtcatctcactctgaaataaaccatgtggcagaggttaacaatcattttgaagataag
agttttgttgaggaagcagttatacctaagcatcaggaagaaaatctcgaagtgttggat
ttggttaaacaagctaggcattcttggataaaaaattttgaatttctccaggattgcacc
attcgcttcttatgtgtgctatcacttgaccgatttggggattatatttctgatcaggta
gttgctcctgtgcgggaagcttgtgcccaagcacttggtgctactttcaagtacatgaat
ccctcggtgatttatgagacattaaatatcttgcttcagatgcagcgccggcctgaatgg
gaaattcgtcatggaagtcttttgggcatcaagtacttggttgctgtgcgacaggaaatg
ctccaagatttgcttggctatattcttccggcgtgtaaagcagggttggaggattctgac
gatgatgtgcgagcagttgctgctgatgctcttataccggcagcagctgctattgtctct
ttgagaggacagacattactttccattgtcatgctactgtgggatatcttgcttgagttg
gatgacttaagtccatcaaccagcagtgttatgaacctcctggcagaaatctattctcaa
gatgacatgaccctggtgatgcatgaggaattatcactgggggaggaacaaaatattgac
ctcaatgaaatgggtcatatcgagagtattggagaaagaagagatgtcaaggaaagccct
tatgcattatcaggtttagcccctaggttgtggccatttacgaggcacgacattacatca
gttcgattttctgctattcgaactctggaacgacttcttgaagctggatgcagaaagaac
atttctgagcagtctaaaagttctttttggccatcttctattttaggggacaccctgaga
atcgtctttcaaaatcttttgcttgaatcaactgaggagattctggagtgttcggagaga
gtgtggagactattggttcagtgcccagtggatgatttagaagacgctgcaaaattctat
atggcttcgtggatagaacttgcagctactccttatggctccacattggatgctacgaaa
atgttttggccagtagctccgcctcgtaagagtcatttcaaagctgctgctaagatgaaa
gctgtcaaacttgagaacgaagcttctagcattatgggatttgattgtgcaagaagttct
gcttccctcgaaaaacatgaagatgtttctgccaggtccactaaaattatcgtcggctct
gatatggaaatgtcagtgacccgcacccgggtagttacagcatctgcattaggtatcttt
gcatcccggttgcgagagggttcaatgcagtttgtggtagatccactgagtagtactctt
acttctctgtccggtgttcagcgccaggttgcgtccattgtgctcatctcttggttcaga
gaaacaaaattcaaggcccctactgatggaagtggaagtttgcctggtttccctagtcct
cttaaaaaatggctgctagatttgttagcttgctcagaccctgctttccctactaaagac
atacttcttccttatgctgagctctcaagaacgtacacgaaaatgaggaatgaaacttct
cagttgttgcatacagttgaaacctgccattgttttgataagttattatcaacgaataaa
ctcaatgtggagagcgtgactgccgatgagacaattgactttgcatcaacactagctttg
tggaacaaagaaagtgttggaaatgaatccttagaaaagcaagtttttgaagatgtggag
tcatctaggcaacagctattaagtactgctggttatttaaagtgtgttcagagtaatcta
catatcacagtcacctccctgatcgctgctgcagttgtttggatgtcagaatttcctgct
agacttaatccaatcatcttgccgctgatggcttcgattaaaagagagcaggaacaaata
ctacagcaaatagctgctgaggctcttgcagagctcattgcatactgcgtagatcggaag
ccaagccccaatgacaagttaatcaagaatatctgtagcttgacgtgcatggatcctagc
gaaacacctcaagctagcatcatttgctctatggatatcattgatgatatggattttctg
tcctcgcggagtaacgcaggaaaacaaaaagcaaaagtcgtgttggctggtggcgaagat
aggtctaaagttgagggttttatcacgaggagaggatctgaactcgcgttgaagcattta
agcttgaaatttggtggttccttgtttgacaaactcccaaaattgtgggagtgcctcact
gaggttcttgttcctgaaattcctgctgatcaacagaatattgaccttaaaatagaatct
atttcggatccacaggtcttaataaacaacatccaggtggtacgttcaatagcaccagtg
atggaagaaacacttaaacctagactactcagtctcctgccttgtattttcaaatgcgtt
cgccattcccatgtagctgttagattggctgcttctagatgtgttatgacaatggctaaa
tcaatgacaacaaatgtcatggcagcagtagtggaaggtgctattccaatgttgggagat
ttgacatgcattaatgctagacaaggcgcaggaatgcttattggtttacttgttcaaggg
ctgggtgttgaactggttccatatgctcctctattggttgttcccctcctaagatgcatg
agcgatgttgacagttcagtcaggcagagcgtgacacgtagctttgctgcccttgtacct
atgcttccattagcacgtggcgtaccccctcctgtcgggttgagcaaggatctatctagc
aatgcagaggatgcaaaatttttggaacagctacttgacaactcccatatagatgattac
aagctttgcactgagctaaaagttcaattaagaaggtatcaacaagaaggaatcaattgg
ttaggattcctgaagcgttttaagctccatggaattctctgcgatgatatggggcttggt
aagacgcttcaagcatctgcaattgtggcatctgatgcagcagagcgtcgtggttcaaca
gatgaaccagatgtttttccatctataattgtttgcccttcaacattagttggtcattgg
gcatttgaaattgagaagtatatcgacctttctctgctaagcgtgttgcagtatgttggc
tctgttcaagaccgtgtttctctccgtgaacagttcaacaaccacaatgtcattataaca
tcttatgatgtggtccgcaaggatgttgattatctgacacaattttcatggaactactgt
atcctggatgaggggcacataattaagaatgctaaatctaaaataacttcagcagtaaaa
caattgaaggcccagcaccgacttatccttagtggaacaccaatacagaataatatcatg
gagctgtggtccctttttgacttcttgatgcctggatttcttgggacagagagacagttt
caagcatcttatggaaaaccgttgctggcagctagagatcctaaatgctctgctaaggat
gctgaagcgggtgtactggcaatggaagcactccataagcaggttatgccattcttactc
agacgtacgaaagaggaagtcctctctgatttgccagaaaaaatcattcaggacagatac
tgtgaccttagtcctgtgcagttgaagctttatgagcaattttctggttcaggtgctaag
caagaaatatctagtatcataaaagttgatgggtcagcagattccggaaatgcagatgtt
gcgccaacaaaagcatccacacacgttttccaggcactacagtacctgcttaaactctgc
agtcatccgcttcttgttcttggggataaggttacagagccggtggcttctgatttgtca
gcaatgataaatggatgttcggatattatcactgagcttcacaaagttcaacactctcca
aagcttgttgctcttcaggaaattttagaagaatgtggaataggttctgatgcttctagt
tcagatggcactcttagtgtaggccagcacagagttctgatatttgcacagcacaaagct
ttgctggatatcattgaaaaggacttgtttcaaacccacatgaaaagtgtcacatatatg
cgactagatggttcagttgtaccggagaaacggtttgagattgtgaaggcctttaattca
gatcctacaattgatgttctgctcctgacaacacatgttggtgggcttgggttgaacctg
acctctgctgatacacttgtatttatggagcatgattggaatccaatgcgtgatcatcag
gcgatggacagagcacatagattgggacagaagagagttgtaaatgtacaccgtctgata
atgcggggcacacttgaagagaaagtgatgagtctccaaagattcaaagtgtcggttgcc
aatacggtaatcaatgctgagaatgcaagtatgaagacaatgaacactgatcagttactc
gacttatttgcttcagctgaaacttctaaaaagggtggtgcgtcttcgaagaatggatca
gaggataatgaccagattgctggaactggaaaaggactgaaggcaattctaggaaactta
gaagaactgtgggatcaatcacagtacacagaagagtacaatcttagccagttcttagct
aagctcaacgggtaa
DBGET
integrated database retrieval system
