Arabidopsis lyrata (lyrate rockcress): 9314063
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Entry
9314063 CDS
T01578
Name
(RefSeq) structural maintenance of chromosomes protein 1
KO
K06636
structural maintenance of chromosome 1
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aly03036
]
9314063
Chromosome and associated proteins [BR:
aly03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
9314063
Meiosis-specific proteins
Cohesin complex and associated proteins
9314063
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_15
AAA_21
AAA_29
EzrA
ABC_tran
CEP135_TSGA10_CC
Sec2p
CCDC18_2nd
AAA_27
DUF3450
YEL043W_helical
DUF2935
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
9314063
NCBI-ProteinID:
XP_020882034
LinkDB
All DBs
Position
Unknown
AA seq
1218 aa
AA seq
DB search
MPAIQTPSGKILQLEMENFKSYKGHQLVGPFKDFTAIIGPNGAGKSNLMDAISFVLGVRT
GQLRGSQLKDLIYAFDDRDKEQRGRRAFVRLVYQMDDGVELHFTRTITSAGGSEYRIDNR
VVNLDEYNGKLRSLGILVKARNFLVFQGDVESIASKNPKELTGLLEEISGSEELKKEYEE
LEEKKASAEEKAALIYQKKKTIGNEKKLKKAQKEEAEKHLRLQEELKALKRERFLWQLYN
IENDIEKATEDVDAEKSNRKDVMRELEKFEREAGKRKVEQAKYLKEIAQREKKIAEKSSK
LGKIQPELLRFKEEIARIKAKIESNRKDVDKRKKEKGKHSKEIEQMQDSIKELNKKMELY
NEKRQDSSGKLPMLDSQLQDYFRLKEEAGMKTIKLRDEHEVLERQRRTDLEALRNLEENY
QQLINRKNDLDEQIKRFKDRQEEIETSSSKYKNETTSLKKELRALQEKHVNARNASEKLK
TRIAELEDQLSDLTAERYENERDSRLTQAVESLKRLFQGVHGRMTDLCRPNRKKYNLAVT
VAMGRFMDAVVVEDENTGKDCIKYLKEQRLPPMTFIPLQSVRVKQVSERLRNLGGTAKLV
FDVIQFDPELEKAVLFAVGNTLVCDELEEAKVLSWTGERHKVVTVDGILLTKAGTMTGGT
SGGMEAKSNKWDDKKIEGLKKKKEEHELELENIGSIREMQMKESEISGKISGLEKKIQYA
EIEKKSIKDKLPQLEQEKRNIIEEIDRIKPELSKAKTEVDKRKTEMNKLEKRMNEIVDRI
YKDFSQSVGVPNIRVYEETQLKTAEKEAEERLELSNQLAKLKYQLEYEQNRDVGSRIRKL
ESSISSLETDLEGIQKTMSERKETAVKITNEINNWKKEMEECKKKSEEYEKEILDWKKQA
SQATTSITKLNRQIHSKETQIEQLISQKQEITEKCELEHITLPVLSDAMEEDDSDGPQFD
FSELDRAYLQERRPSAREKVEAEFRQKIESKTSEIERTAPNLRALDQYEAIQEKEKQVSQ
EFEAARKEEKQVADAFNTVKQKRYELFMEAFNHIASNIDKIYKQLTKSNTHPLGGTAYLN
LENEDDPFLHGIKYTTMPPTKRFRDMEQLSGGEKTVAALALLFSIHSYRPSPFFILDEVD
AALDNLNVAKVAKFIRSKSCQAARDNQDTEDGNGFQSIVISLKDSFYDKAEALVGVYRDT
ERSCSSTMSFDLRNYQES
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcgatacaaaccccatcggggaagatcttgcagcttgagatggagaatttcaaa
tcttacaagggtcaccaattggttggtcctttcaaggatttcactgctattattggtccc
aacggtgctggcaaatctaacctaatggacgctattagctttgtgctcggtgttcgtacc
ggtcaacttcgtggttctcagcttaaggatcttatctacgcttttgatgaccgtgacaag
gaacagagaggtcggagagcgtttgttcgcctcgtttatcagatggacgatggtgtagag
cttcatttcactcgtactattactagcgctggtgggagtgagtaccgtatcgataatagg
gttgtgaatttggatgagtacaatgggaagctacgatctctagggatacttgttaaggct
cgtaatttcttggtgtttcagggtgatgttgaatctattgcctcgaagaatccaaaagaa
cttactggactcctcgaagagatttctgggtccgaggagcttaagaaagagtatgaagaa
ctagaagaaaagaaggccagcgctgaagaaaaagcagctcttatataccagaagaagaaa
actatagggaatgagaagaagctgaagaaagcacagaaggaagaagctgagaagcatcta
aggctgcaggaagaactgaaagctctgaagagagaacgcttcctatggcaattatataac
attgaaaatgatatcgagaaggcgactgaggatgttgatgctgaaaagagcaatcgtaaa
gatgtcatgagagagctggaaaagtttgaacgtgaggcaggtaagagaaaggtagaacaa
gctaagtatctgaaagaaattgctcaacgtgagaagaagattgctgagaaaagctcgaaa
cttggaaaaattcaacctgagcttctgagatttaaggaggagatagctcgcattaaagca
aaaattgagagcaacagaaaggacgtggataagaggaaaaaagaaaaagggaagcattcc
aaagaaattgaacagatgcaggatagcattaaggagctgaataagaaaatggaattatat
aatgagaagagacaagatagcagcggaaaactcccaatgcttgacagtcaactgcaagat
tattttcgactaaaagaagaagctggaatgaaaaccataaagctaagagatgagcacgag
gttctagagaggcaacggcgtactgatcttgaagcattgagaaatctggaagaaaattac
cagcaactaataaacaggaagaatgatcttgatgaacaaattaagcgatttaaagacagg
caagaagagattgaaacatcttcttcgaaatataagaatgaaacaactagtcttaaaaag
gagttacgtgcactgcaagagaagcacgtaaatgccaggaatgcctctgagaagttgaag
actagaatcgcggaattagaagaccagttaagtgatttaacggctgaaaggtatgaaaat
gagagagatagtaggctaacacaggctgttgagtctctcaagcgtctatttcaaggagtt
catggtcggatgactgatctttgtcggccaaatcggaagaagtataaccttgctgtcact
gttgccatgggaagatttatggatgcagtagttgtagaagatgaaaacacgggaaaggat
tgcatcaagtacttgaaagagcaaaggcttcctcctatgacatttattcctcttcagtca
gtacgtgtcaagcaagtgtctgaaagattgagaaatttgggtggcacagcaaaactggtg
ttcgatgttatccagttcgatcctgaattggagaaggcggtcctctttgctgttggaaat
actcttgtctgcgacgaacttgaagaagccaaggttcttagctggaccggagagagacat
aaagttgtgactgttgatggtatattactcacaaaggcgggaacaatgactggtggtacc
agtggtggaatggaagcaaagtctaataaatgggatgataagaaaattgaaggtttgaag
aaaaagaaagaagaacatgaactagaattggaaaatattggatctattcgagaaatgcaa
atgaaggagtctgaaatatcgggtaaaataagtggacttgaaaaaaagattcagtatgct
gaaattgagaagaaaagcatcaaagacaaacttccacagcttgagcaagagaagcggaat
atcattgaagaaattgatcgcataaagcctgaactctctaaggcaaaaactgaggtcgat
aagagaaagacagaaatgaataagttggagaaaagaatgaatgagattgtggaccgtatc
tataaggattttagccagtctgttggggttccaaacatacgtgtatatgaagaaactcag
ctgaagactgctgaaaaggaggctgaagaaaggctggaactgagtaatcagcttgctaag
ttaaaataccagctggaatatgagcaaaaccgagatgtggggtcacggattcgaaagcta
gagtcttctatcagttctctggaaactgatttggaaggtatacagaagacaatgtctgaa
cgtaaggagacagcagtaaaaattactaatgaaatcaacaattggaagaaggaaatggaa
gagtgcaaaaaaaagtcggaggagtatgagaaggaaatcctggattggaaaaaacaggct
tctcaagcgacaacaagcataaccaagctcaatcgtcaaatacattcgaaggaaacacaa
attgagcagctgatctcgcagaaacaggaaataactgagaagtgtgagctcgaacatatt
acccttcctgtcttatcagatgctatggaggaagatgactcagatgggccacagtttgac
tttagtgagctagatagagcttatctccaagaacggagaccatctgctcgtgaaaaagtg
gaggcggaatttaggcagaaaatagaatctaaaacatccgagattgaaagaacggctcca
aatttgagagcgcttgaccagtatgaggctatacaagagaaggaaaaacaagttagccag
gagtttgaagcggccaggaaagaggagaagcaagtagcggatgcctttaatactgttaag
cagaagaggtatgagctatttatggaagctttcaaccacattgctagcaacattgacaag
atctataagcaactaaccaagagtaatacgcacccactgggtgggactgcttatctaaac
ctagaaaatgaagatgatccgtttctacatggtataaagtatactacaatgcccccaaca
aagcgatttcgtgacatggaacagctctctggaggagagaaaacagttgcggccttggca
ttgctcttctccatccatagctataggccttcaccctttttcatacttgatgaagtggat
gctgcgcttgataatttaaacgtggcaaaagttgctaaattcatacgtagcaagtcatgc
caagcggcacgtgacaatcaggatacagaggatgggaatggcttccaaagcattgtaata
tctctcaaggacagcttctatgacaaggcggaagctctggttggagtttacagagacact
gagaggagttgctcgagtacaatgtcatttgaccttcggaactaccaagaatcgtga
DBGET
integrated database retrieval system
