Arabidopsis lyrata (lyrate rockcress): 9314074
Help
Entry
9314074 CDS
T01578
Name
(RefSeq) probable pectate lyase 13
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00040
Pentose and glucuronate interconversions
aly01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
9314074
Enzymes [BR:
aly01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
9314074
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
9314074
NCBI-ProteinID:
XP_002876277
UniProt:
D7LUZ0
LinkDB
All DBs
Position
Unknown
AA seq
490 aa
AA seq
DB search
MLLPNFSNTIFLLCFLFTLIAATKPLNLTLPHQHPSPDSVALHVIRSVNESLARRQLGSS
SSSSSSSSSSCRTGNPIDDCWKCSDSDWSSNRQRLADCSIGFGHGTLGGKNGKIYVVTDS
SDNNPTNPTPGTLRYGVIQEEPLWIVFSSNMLIRLKQELIINSYKTLDGRGSAVHITGNG
CLTLQYVQHIIIHNLHIYDCKPSAGFEKRGRSDGDGISIFGSQKIWVDHCSMSHCTDGLI
DAVMGSTAITISNNYFTHHDEVMLLGHDDNYAPDTGMQVTIAFNHFGQGLVQRMPRCRRG
YIHVVNNDFTEWKMYAIGGSGNPTINSQGNRYAAPSDPSAKEVTKRVDSKDDGEWANWNW
RTEGDLMENGAFFVASGEGMSSMYSKASSVDPKAASLVDQLTRNAGVFGGPRDDQGQSGN
SYSPYGGDGGGGMDDMGGMSGTTRGSSSSGDDSNVFQMIFGSDAPSQPRLTLLFSLLMIS
VLSLSTLFLW
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgcttcttccaaacttctccaacaccattttccttctctgcttcctcttcacactcatc
gccgccacaaaacccctaaatctcactctccctcaccaacatccttcccctgattccgtc
gctctccatgtcatcaggagtgtcaatgaatctcttgcaagaagacaactaggctcgtcc
tcatcatcatcatcatcatcatcctcctcttgccgtaccggaaacccaatcgacgattgc
tggaaatgcagcgactcagactggtcatcaaaccgacaaagactcgccgactgttcaatc
ggcttcggacacggcacactcggaggcaaaaacggcaagatctacgtcgttacagactcc
tccgacaacaacccaacaaacccaacaccaggaacactccgttacggcgtaatccaagaa
gagccactctggattgtcttctcttcaaacatgctcatcagattaaaacaagaactcatc
atcaacagctacaaaaccttagacggtcgtggctcagccgtacacataactggaaacggt
tgcttaactctccaatacgttcaacacatcatcatccacaacctccatatctacgactgc
aaaccttcagctggattcgaaaaacgaggtagatccgatggagatgggatctcgattttc
ggatctcagaagatctgggtcgatcattgttcaatgagtcattgcaccgacgggcttatt
gatgctgtgatgggttctacagctataactatatctaacaattacttcacgcatcacgac
gaagtgatgttgttgggtcatgatgataattatgctcctgatacggggatgcaagtgacg
atagcgtttaatcattttggacaagggcttgttcagaggatgcctagatgtcggagaggt
tatattcatgtggtgaataatgatttcactgagtggaaaatgtatgctattggtggtagt
ggtaatcccaccattaacagtcaaggaaatcgttacgctgctccttctgatcctagcgcc
aaagaggtgacgaagcgagtggactcgaaggacgatggtgaatgggcgaattggaattgg
agaacagaaggagatttgatggagaatggagctttctttgtggcttctggtgaaggaatg
agctcaatgtactctaaagcttcaagtgttgaccctaaagctgcttctcttgtagaccag
ctcactcgaaacgctggcgtttttggcggtcccagggatgatcaaggccagagtggcaat
tcttattctccttatggaggcgacggcggaggagggatggacgatatgggtggtatgagc
ggtacaacgagaggaagcagcagcagcggcgacgacagcaatgtcttccagatgatattt
ggaagcgatgcaccgtctcagccgcgattaacgttattgttttctttgttaatgatttcg
gttttgtcattatcaactctatttttgtggtag
DBGET
integrated database retrieval system
