Arabidopsis lyrata (lyrate rockcress): 9314193
Help
Entry
9314193 CDS
T01578
Name
(RefSeq) ribosomal RNA small subunit methyltransferase nep-1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
9314193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aly03009
]
9314193
Enzymes [BR:
aly01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
9314193
Ribosome biogenesis [BR:
aly03009
]
Eukaryotic type
90S particles
Other 90S particles
9314193
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
9314193
NCBI-ProteinID:
XP_020879810
LinkDB
All DBs
Position
Unknown
AA seq
298 aa
AA seq
DB search
MVRPYGIKVNKRKERTERYDKEEEEVEEQPKFERKQKARESSKKAKKEITSRAEEGNEEE
EITEEVTAAAAEDIVGGIPIVLSAPNKEKPGVVFVLEKASLEVAKVGKTYQLLNSDDHAN
FLRKNNRNPADYRPDITHQALLMILDSPVNKAGRLKAVYVRTEKGVLFEVKPHVRIPRTF
KRFAGIMLQLLQKLSISAVGSGEKLLRCVKNPIEEYHLPVNSRKIGFSHSSEKLVNMQKH
LATISDDTDTVFVVGAMAHGKIECDYIDEFLSISGYPLSAAYCISRICEALATNWNII
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggccgtatgggattaaagtgaacaagagaaaggagagaacagagaggtatgat
aaggaagaagaagaagtagaggaacaaccaaagtttgagcgaaaacaaaaggcaagagaa
agttcgaagaaagctaaaaaagaaatcacttcaagagcagaggaaggtaatgaagaggag
gaaataactgaggaagtaacagcagcagcagcagaggatattgtgggagggatacctatt
gtccttagtgctcctaacaaggaaaagcccggtgttgttttcgtgcttgagaaggcctct
cttgaagttgccaaagttggaaagacttaccagctactgaactcggatgatcatgctaat
ttcttgagaaagaacaacagaaatccggctgattaccgaccagacatcactcatcaggct
cttcttatgattttggatagtccggttaataaggctgggaggttgaaagcggtatatgtt
agaacagaaaaaggtgtcctttttgaagttaagccacatgttcgtataccaagaactttc
aaacgatttgctggaatcatgttgcaattgctacaaaagctgagcatttctgcagttggc
agcggtgagaagcttctacggtgtgtcaagaaccctatcgaagaatatcatctaccggtt
aactcccgaaaaataggcttctcgcatagctctgaaaaactcgtcaatatgcagaaacac
ctagctactatatctgatgatacagacacagtttttgtggtcggcgcaatggcacacggg
aaaatagagtgcgactatatcgatgagtttttgtcgatttcagggtatccattgagcgca
gcctactgtatctcaagaatctgcgaggcattagcaacaaattggaatatcatataa
DBGET
integrated database retrieval system
