Arabidopsis lyrata (lyrate rockcress): 9314213 Help Entry 9314213           CDS       T01578                                  Name (RefSeq) DNA helicase INO80   KO K11665   chromatin-remodeling ATPase INO80 [EC:5.6.2.-] Organism aly  Arabidopsis lyrata (lyrate rockcress) Pathway aly03082   ATP-dependent chromatin remodeling Brite KEGG Orthology (KO) [BR:aly00001]  09120 Genetic Information Processing   09126 Chromosome    03082 ATP-dependent chromatin remodeling     9314213  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:aly03036]     9314213 Chromosome and associated proteins [BR:aly03036]  Eukaryotic type   Chromatin remodeling factors    INO80 complex     9314213    INO80 complex (yeast)     9314213 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SNF2-rel_dom DBINO Helicase_C ResIII DEAD HDA2-3 Motif Other DBs NCBI-GeneID:  9314213 NCBI-ProteinID:  XP_002876410 UniProt:  D7LVR2 LinkDB All DBs Position Unknown AA seq 1507 aa AA seqDB search MDPSRRPPKDSPYANLFDLEPLMKFRIPKPEDEVDYYGSSSQDESRSTQGGVVANYSNGS KSRMNVNSKKRKRWTEADDAEDDDDLYNQHVTEEHYRSMLGEHVQKFKTRSKESQGNPPH LMGVPVLKSNVGSYRGRKPGNDHYGRFYDMDSSPNFAADVIPHRRESYHDRDITSKIAYE PSYLDIGDGVIYKIPPSYDKLVASLNLPSFSDIHVEEFYLKGALDLRSLAELMASDKRSG VRSRNGMGEPRPQYESLQARMKALSPSNSTLNFSLKVSEAAMNSAIPEGSAGSTARTILS EGGVLQVHYVKVLEKGDTYEIVRRSLPKKLKAKNDPAVIEKTERDKIRKAWINIVRRDIA KHHRIFTTFHRKLSIDAKRFADGCQREVRMKVGRSYKIPRTAPIRTRKISRDMLLFWKRH DKQMAEERKKQEKEAAEAFKREQELREAKRQQQRLNFLIKQTELYSHFMQNKTDSNPSEA LPIGDENPIDEVLPETSAAGPSEVEDPEEAELKEKVLRAAQDAVSKQKQITDAFDTEYMK LRQTSEMEGPLNDISVSGSSNIDLHNPSTMPVTSTVQTPELFKGTLKEYQMKGLQWLVNC YEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPD LKTLPYWGGLQERTILRKNINPKRMYRRDAGFHILITSYQLLVTDEKYFRRVKWQYMVLD EAQAIKSSASIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPMLFDNHDQFNEW FSKGIENHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVVSELTTKTEVTVHCKLSSRQQ AFYQAIKNKISLAELFDSNRGQFTDKKVLNLMNIVIQLRKVCNHPELFERNEGSSYLYFG VTSNSLFPHPFGELEDVHYSGGQNPIIYKMPKLLHQEVLQNSETFCSSVGRGISRESFLK HFNIYSPEYILRSIFPSDSGVDQMVSESGAFGFSRLMDLSPVEVGYLALCSVAERLLFSI LRWERQFLDELVNSLMESKDDDLSDNNIERVKTKAVTRMLLMPSKVETNFQKRRLSTGPT RPSFEALVISHQDRLLSNIKLLHSAYTYIPKARAPPVSIHCSDRNSAYRVTEELHQPWLK RLLIGFARTSEANGPRMPNSFPHPLIQEIDSELPLVQPALQLTHRIFGSCPPMQSFDPAK LLTDSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMD RRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQ TKDVTVYRLICKETVEEKILHRASQKNTVQQLVMTGGHVQGEDFLGAADVVSLLMDDAEA AQLEQKFRELPLQVKDRQKKKTKRIRIDAEGDATLEELEDAERQDNGQEPLEEPEKPKSS NKKRRAASTPKSRAPQKAKEEANGEDTPQRTKRVKRQTKSINESLEPVLSASVTETNKGF DPSSSAN NT seq 4524 nt NT seq  +upstreamnt  +downstreamnt atggatccttcaagacgaccaccgaaggactctccttacgcgaatctcttcgatctcgag ccgttgatgaagttcagaattccgaaacctgaagatgaagttgattattatgggagtagt agccaggatgaaagtagaagcactcaaggtggggtagtggcaaactacagcaatgggtct aaatcgagaatgaatgtgaactccaagaagagaaagcggtggacagaagctgatgatgca gaggatgatgatgacctctacaatcaacatgttactgaggagcactaccgatcaatgctt ggggagcatgtacaaaaattcaaaactaggtccaaggagtctcaagggaatcctccacat ctgatgggtgttccggtgctaaagagcaatgtgggcagttacagaggtaggaaaccaggg aatgatcactatgggagattctatgacatggacagctctccaaattttgcagctgatgtg atcccacataggcgagaaagctaccatgatcgtgatattacctccaaaatagcatatgaa ccttcgtatttggacattggtgatggtgtcatctacaaaatccccccaagctatgacaag ctggtggcatcattaaacttaccaagcttttcagatattcatgtggaagaattctacttg aaaggagctctggatctgagatcattagcagaactgatggctagtgataaaaggtctgga gtaagaagccgtaatggaatgggtgagcctcgacctcaatatgaatctcttcaagctaga atgaaggccctgtcaccttcaaactctaccctaaattttagcctcaaggtgtcagaagct gcaatgaattctgccattccagaaggatctgctggaagtactgcacggacaattctgtct gagggtggtgttttacaggtccattacgtgaaggttctggagaagggggatacatacgag attgttagacgaagtctaccgaagaagctgaaagcgaagaatgatcctgcagtcattgag aaaacagaaagggataaaattagaaaagcctggatcaatatagtcagaagagatatagca aaacaccatagaatttttactacttttcatcgaaaactatcaattgatgccaagaggttt gcagatggttgccaaagagaggtgcgaatgaaggtgggtagatcatacaaaatcccaagg actgcaccgattcgcactaggaagatatccagagacatgctgctattctggaagcgacat gacaagcagatggcagaagagaggaaaaagcaagaaaaggaagctgcagaggcttttaaa cgtgaacaggagcttcgagaggcaaaaaggcagcaacaaaggctcaattttcttattaaa cagactgagctttacagtcacttcatgcaaaacaagaccgattcaaatccttccgaagcc ttaccaataggtgatgaaaatccaattgacgaagtgctcccagaaacttcagcggcagga ccttctgaggtggaggatcctgaagaggctgaactgaaggaaaaggtcctgagagctgcc caagatgcggtgtctaagcagaagcaaataactgatgcatttgacactgaatatatgaag ctacgccaaacttctgaaatggaaggtcctttaaatgatatatcagtttctggctcgagc aatatagatttgcataacccatctacaatgcctgttacatcaacagttcagactccagag ttatttaaaggaacccttaaagaataccaaatgaaaggccttcagtggctagtcaattgt tatgagcagggtttgaatggcatacttgctgatgaaatgggcttgggtaagactattcaa gctatggctttcttggcacatttggctgaggaaaagaacatttggggtccatttctggtt gttgcccctgcctctgttcttaacaattgggctgatgaaatcagtcgtttctgtcctgat ttgaaaactcttccatattggggaggattacaagaacgaacaattttaagaaagaatatc aatcccaagcgaatgtaccgaagggatgctggctttcatattttgattactagctatcag ctattagtcaccgatgaaaagtattttcgccgggtgaagtggcaatatatggtgctagat gaggcccaagcaatcaagagttccgccagtataagatggaaaacccttcttagttttaac tgtcggaaccgattgcttctgactggtactccaattcagaacaacatggcagagttatgg gccctgctgcatttcatcatgccaatgttgtttgacaaccatgatcaatttaatgagtgg ttctcaaaaggaattgagaatcatgctgaacacggaggcactttaaatgagcaccagctt aacagactgcatgcgatcttaaaaccgttcatgcttcgacgggtaaaaaaggatgtggtt tctgagctaactacaaagacggaagttacagtacactgcaagctcagttcgcgacaacaa gctttttatcaggctattaagaacaaaatttctctggctgagttgtttgatagcaaccgc ggacaatttactgataagaaagtactgaatttaatgaatattgtcattcaacttaggaag gtttgcaaccatccagagttgttcgaaaggaatgaagggagctcgtatctctactttgga gtgacttccaactctcttttcccccatccctttggtgagctagaggatgtacattattct ggtggtcaaaatccgataatatacaagatgcctaaactactacaccaagaggtcctccaa aattctgaaacattttgttcttccgttgggcgtggcatctcaagagaatcctttctgaag cattttaatatatattcacctgagtatattcttaggtcaatattcccatctgatagtggg gtagatcaaatggttagtgaaagtggagcatttggcttttcacgcttgatggatctatca ccggtagaagttggatatctggcgctgtgttctgttgcagaaaggctattattctctata ctgagatgggagcggcaatttttggatgaattagtgaactctcttatggaatccaaggat gatgatcttagtgacaataacatcgagagagttaaaaccaaagctgtcacaagaatgtta ctgatgccatcaaaagttgaaacgaattttcagaaaaggagactaagcacagggcctacc cgtccttcatttgaagcgctagtgatctctcatcaggataggcttctttcaaatatcaaa ctcctgcattctgcatatacttatatcccaaaagccagagctccaccggtaagcattcat tgctcggacagaaattctgcatacagagttacagaagaattacatcaaccatggctcaag agactattaatcggttttgcacgtacatcagaagctaacggacccaggatgccgaacagt tttccacatcctttaatccaagagattgattcagaacttccacttgtgcagcctgcgctt caactgacacacagaatatttggttcttgccctccaatgcaaagttttgacccagcaaag ttgctcacggactctgggaagctgcagacacttgatatattattgaagcggcttcgagct ggaaatcacagggtgctcctgtttgcacaaatgacaaagatgctgaacattctcgaggat tacatgaactatagaaagtacaagtacctcaggcttgatggatcctccaccatcatggat cgccgagatatggttagggattttcagcataggagcgatatttttgtattcttgctgagc acgagagctggaggacttggtatcaacttgacggctgcagacactgtcattttctatgaa agtgattggaatcccaccttggatttacaagctatggacagagctcatcgtcttggacag acaaaagatgttactgtttatcggctcatctgtaaggagacggtggaagagaaaattttg cacagggcaagtcagaaaaatacagttcaacagcttgttatgactggagggcatgttcag ggtgaggattttcttggagctgcggatgtggtatcgctgctgatggatgatgcagaggca gcacaactggagcagaaattcagagaactaccattacaggtaaaggacaggcagaagaaa aagacgaaacgtatcagaatagatgctgaaggagatgcaactttggaagagttagaagat gctgaacgacaggataacggacaggaacctttggaagaaccggaaaagccaaaatccagt aataaaaagaggagagctgcttcaactccgaaatctagagctcctcagaaagcaaaggaa gaagcaaatggtgaagatactcctcaaaggacaaaaagggtaaagagacaaacaaagagc ataaacgagagtcttgaacctgtcttatctgcctctgttacagaaacaaataaaggattc gatccaagtagctccgccaactaa

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