Arabidopsis lyrata (lyrate rockcress): 9314482
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Entry
9314482 CDS
T01578
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
9314482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aly03400
]
9314482
DNA repair and recombination proteins [BR:
aly03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
9314482
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
Motif
Other DBs
NCBI-GeneID:
9314482
NCBI-ProteinID:
XP_002878414
UniProt:
D7LSP4
LinkDB
All DBs
Position
Unknown
AA seq
659 aa
AA seq
DB search
MEGRDDGGGKVMGLIEKATKSTAQEVDPRLLKAIKSIVRYSDSEVRLSAQTLMELMRHNH
SQVRYLTLFIIDELFMRSKLFRTLIIENLDQLLSLSVGFRSNLPLPSPPAVATMLRSKAI
EFLEKWNLSFGFHYKELRLGFDYLKNTLKLKFPDLQANAARIQRERQEREMKTKEILRNK
FDSLRDSFGLFKYEIEVTIKEIKECMEIVQWRGDDGVPLAILDEEDFEEIRCSHLRQIRL
DSLKQSEKVEETSENRVVFDVLREQCKLLVTKHLISVQEGISLLIRVDVSDNRTRDSMLK
DLIDIRNNILAAKKKWEEAGFTISMMTGTHENEETNEEEEDIWEEDDGKVGTDSVKNVAP
VTRTQQSDNSSLLSSSEAKKSNKASNTKKVGSTGGSLRDKLISEAPVMNWGSQLSNWDST
TEVRANYRGLELESHWGRVDQDAVIPAEKIAELNLQATVYREERTETPPCRAPLKKGGLC
QRRDLRVCPFHGPIVPRDDEGKPIIQESPLDESINQTSSTTGTNQDMPMDETTSDSDPNQ
LARQIAKQALKNIREKDKEVMRKRAKLVKVKVKEHNQEVLRDAAIASTSRSNVIDEEFDR
VFAARKNKKQTFSSMRRKKTTAKDRISQRLLSNRVKSTNPQQLGQGNDEKCRETSANQW
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggaagggagagatgacggcggagggaaagtgatggggttgatagagaaagcgacgaaa
tcaactgctcaagaggttgacccgaggctgcttaaggcgatcaaatctattgtccggtat
tctgattcggaggtccgactcagtgcgcaaaccctaatggagctcatgagacataaccac
tctcaggttcgatatctgacgcttttcataatcgacgagcttttcatgagatcaaagctc
tttagaactttgataattgagaatcttgatcagcttttgagtttaagtgttgggtttaga
agcaatctgcctcttccttcaccacctgctgttgccactatgttgcgttcaaaggctatt
gagttcttggagaagtggaatttgtcttttgggtttcattacaaggaacttaggcttggg
tttgattaccttaagaataccctcaagttaaagttccctgatttacaggctaatgctgca
cggattcaacgagagagacaggagagggagatgaagacaaaagagattttacggaacaag
tttgattccttgagggatagttttggactcttcaagtatgagattgaggtaacgataaag
gaaatcaaggagtgtatggaaattgttcaatggagaggggatgatggtgttccacttgcg
atcttagatgaggaagattttgaggagatccgttgttctcatctgaggcaaattcgtctt
gattcactcaaacaatcagaaaaggttgaagaaactagtgaaaacagagttgtattcgat
gtattgagggaacaatgcaagcttctagtgacaaagcatctgatctctgttcaagaaggg
atctctcttctcatcagggttgatgtaagtgataacagaacgagagattccatgttgaaa
gacttaatcgatatcaggaataacatattggcggctaaaaagaaatgggaagaagctggt
tttacaatttcaatgatgactggtactcacgagaatgaagaaacaaacgaggaagaagaa
gatatctgggaggaggatgatggtaaggttggaactgattcagtcaagaacgtggctcct
gtgacaagaactcagcagagtgataattcatctttactatcatcaagtgaagcaaagaag
tccaataaagcgtcaaacactaaaaaagttggaagcactgggggctctcttagggacaag
ctaatttctgaagcgcctgtgatgaattggggatcacagttgagtaattgggactcaact
acggaagttcgagctaattaccgggggttagagctcgagagccactggggcagggtggat
caagatgctgtaattccggcagagaaaatagcagaattgaatcttcaggcaactgtttat
agagaagagagaacagagacacctccatgccgtgctcctctaaagaaaggtggtctttgc
cagagaagagatctcagagtctgtccgtttcatggacccattgtacctcgggatgatgaa
ggaaaacccataatccaggaatctccattagatgagagtattaaccaaacgtcttctact
acagggaccaaccaggatatgcctatggatgaaacaacttcagattctgatcctaatcag
ttagctaggcaaatagcgaaacaggctctgaagaatatccgggagaaagacaaagaagtg
atgaggaaaagagcaaagcttgttaaggttaaggttaaggaacacaatcaagaagttctg
cgtgatgctgctatagcctcaacttctagatcaaatgttatcgatgaagagtttgataga
gtttttgctgcaaggaaaaacaagaaacaaaccttttcctcgatgcggcgaaagaaaaca
acggctaaagatagaatatcccagagactgcttagtaatcgtgtaaaaagtactaatccg
cagcagttgggtcagggcaatgatgaaaagtgccgggaaacatcggctaaccagtggtaa
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