KEGG   Arabidopsis lyrata (lyrate rockcress): 9314586
Entry
9314586           CDS       T01578                                 
Name
(RefSeq) protein transport protein SEC31 homolog B isoform X1
  KO
K14005  protein transport protein SEC31
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    9314586
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:aly04131]
    9314586
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:aly02044]
    9314586
Membrane trafficking [BR:aly04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    9314586
Secretion system [BR:aly02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   9314586
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_EML_2 WD40 WDR55 TPR_Sec16 TPR_GEMI5 Beta-prop_EIPR1 Beta-prop_EML SRA1 MIOS_WD40 Beta-prop_DCAF4 EIF3I Beta-prop_SCAP Prp18
Other DBs
NCBI-GeneID: 9314586
NCBI-ProteinID: XP_002878518
UniProt: D7LTR3
LinkDB
Position
Unknown
AA seq 1104 aa
MACIKGVGRSASVALAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSDDRDLPLVGE
SPSSERFHRLAWGRNGSGSEEFSLGLIAGGLVDGNIDLWNPLSLIGSQPSENALVGHLSV
HKGPVRGLEFNAINPNLLASGADDGEICIWDLLKPSEPSHFPLLKGSGSATQGEISFISW
NRKVQQILASTSYNGTTVIWDLRKQKPIINFADSVRRRCSVLQWNPNITTQIMVASDDDS
SPTLKLWDMRNILSPVREFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTICWDTNTAEIVA
ELPAGNNWNFDVHWYPKIPGVISASSFDGKIGIYNIEGCSRYGAEENNFGTAPLRAPKWY
KRPVGASFGFGGKLVSCHARAPAKGTSSILSEVFLHSLVTEQSLVSRTSEFEAAIENGDM
TSLRGLCEKKSEETESEEEKETWGLLKIMFEEEGTSRTKLISHLGFTLPIAENDQAVNGL
SSDLNGNRLEDTAADAMEPDDSNEAAAFAMDNGEDFFNNFPAKPDTPVSTSAKDFMPSDT
DFSTKAEETQEMQEEEEESSDPVFDNAIQRALIVGDYKEAVDQCISANKMADALVIAHVG
GTALWESTREKYLKTSSAPYMKVVSAMVNNDLRSLIYTRSHKFWKETLALLCTFAQGEQW
TTLCDALASKLMAAGNTLAAVLCYICAGNVDRTVEIWSRSLANERDGRSYAELLQDLMEK
TLVLALATGNKKFSASLCKLFESYAEILASQGLLTTAMKYLKVLDSGGLSPELSILRDRI
SLSAEPETNTAASGNTQPQSTMPYNQEPTQAQPNVLANPYDNQYQQPYTDSYYVPQASHP
PMQQPTMFMPHQAQPAPQPSFTPAPASNAQPTMRTTFVPSTPPALKNADQYQQPTMSSHS
FTGPSNNAYPVRPGPGTYAPSGPSQVGQYPNPKMPQVVAPAAGPKGFTPMATPGVAPRSV
QPASPPTQQAAAQAAPTPATPPPTVQTADTSNVPAHQKPVIATLTRLFNETSEALGGARA
NPTKKREIEDNSRKLGALFVKLNSGDISKNAADKLAQLCQALDNNDYSAALQIQVLLTTN
EWDECNFWLATLKRMMVKARQSVR
NT seq 3315 nt   +upstreamnt  +downstreamnt
atggcttgcatcaagggggtgggcagatccgcctccgttgccctggctcccgacgctcct
tacatggccgccggaaccatggccggagccgtcgatctctcctttagctcttccgccaat
ctcgagatctttaagctcgactttcagtctgacgatcgcgatttgcctctcgttggggaa
agccccagctccgagcgcttccatagactcgcctggggaagaaacggatctggatccgag
gaattctcccttggtcttattgccggcggccttgtcgacggaaatatagatctgtggaat
cctctttctttgatcggttcccagcccagtgaaaatgcactcgttggccatctttcagtt
cacaaaggccctgttcgtggtcttgagtttaatgctatcaacccaaatctacttgcttct
ggggctgatgatggtgaaatttgcatttgggacttattaaagccttcagagccttctcat
tttccacttctcaagggtagtggttctgctacgcaaggtgaaatctcctttatatcgtgg
aatcgaaaagttcaacagatattagcttctacctcatacaatgggactactgtaatatgg
gacttgaggaagcagaagcctataattaactttgcagattcagttcgacgtcggtgctct
gttttacagtggaaccctaacattactactcagataatggttgcatcagatgacgacagt
tcacctactttgaagctctgggacatgaggaatatattgtcacctgtgcgcgagtttact
ggacaccaaagaggggtgattgcaatggagtggtgtccaagtgacagctcatatcttctt
acctgtgctaaggacaaccgaacgatttgctgggacacaaatacagcagagattgtggct
gagttgcctgctggcaacaattggaattttgatgttcattggtacccaaagatacctgga
gttatatcagcatcatcatttgatgggaaaattggcatctacaacatcgagggttgcagt
cgatatggtgctgaagagaataattttggtactgctcctttaagagcaccaaaatggtat
aagcgcccggttggtgcatcttttggatttgggggaaagcttgtatcgtgtcacgcaagg
gcccctgcaaagggtacttcgagcattctatccgaggtttttttgcacagcctggtaaca
gaacagagtttggtgagtcgaacttctgaatttgaagctgcaatagaaaatggagatatg
acttctctaaggggtttgtgcgagaagaaatcagaagagactgaatccgaagaggagaaa
gagacatggggcttactgaaaatcatgttcgaagaggaaggaacttcaaggacaaagttg
atcagccatcttggctttactttgcctattgcggaaaatgatcaggcagtaaatgggctc
tcatcagatctgaatggcaatagattagaggatactgcggcggatgcaatggaacctgac
gacagtaacgaggcagctgcatttgctatggataatggagaagacttctttaacaacttt
cctgctaaaccggatacacctgtatctacgtctgccaaagattttatgccttctgacaca
gatttttctaccaaagcagaagaaactcaagaaatgcaagaagaagaggaagaaagttct
gacccagtatttgataatgccatccagcgtgctttgattgttggagattacaaggaggct
gtggatcagtgtatatctgcaaataagatggccgatgctttagttattgctcatgttggt
ggtacagcgttgtgggagagtactcgtgagaaatatttgaagacgagcagtgcgccttac
atgaaggttgtttctgcgatggtgaacaatgatctcaggagccttatctatacaaggtca
cataagttctggaaagagactcttgctctcctctgtacttttgcacaaggagaacaatgg
accaccctgtgcgatgcccttgcctcgaagttgatggctgctggtaacactttggctgca
gttctctgctacatttgcgcaggcaatgttgacagaacagtagaaatttggtcgaggagc
cttgcaaatgagcgggatggaagatcttatgctgagcttcttcaagatcttatggagaag
actcttgtccttgctttggcaactggcaacaaaaagttcagcgcatctctgtgtaaactc
tttgagagttatgctgagatactggccagccaagggcttcttacaacggcaatgaagtac
ttaaaagttctggattctggtggcttgtcgcctgaactttcaatattacgtgatcgtatt
tctctgtctgcagaacctgagactaacactgcagcttcaggaaacactcagcctcaaagc
accatgccatataatcaggagccaactcaggcgcaaccaaacgttcttgcaaacccatat
gataatcagtatcagcaaccatacactgattcttattatgtccctcaagcttcacatcca
cccatgcagcaaccaaccatgtttatgcctcaccaagctcagccagctccgcagccatct
ttcactccagctcctgcaagcaatgctcagccaaccatgaggactacatttgttccttca
actccccctgcactgaagaatgcagaccaatatcagcagccaaccatgagttctcattca
ttcacgggaccatctaacaatgcatacccggttcgcccgggtcctggtacatatgcacct
tctggcccttcacaagttgggcaatatcctaaccctaagatgccccaagttgtggctcca
gcagctggacccaaaggatttacgcccatggcaactccaggagttgctccaagatctgtg
caaccagctagtcctccaacacagcaggcagctgcgcaggcagcccctacgcctgcaact
ccgccaccaactgttcagactgcagatacttccaacgttccagcccaccagaaacctgtg
atagcaacgttgacaaggctttttaatgagacatcggaagcactgggaggcgcacgtgca
aatcctactaagaagcgtgagatagaagacaactcgagaaaattaggtgctctgtttgtg
aaactcaacagcggagacatctccaagaatgctgcggacaaactcgcacagctgtgtcaa
gctctggacaacaatgactacagcgcagcccttcaaatacaggtacttctgacgaccaac
gaatgggacgaatgcaacttctggctggcaacactaaagcggatgatggtcaaggcgagg
caaagtgtgcgatga

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