Arabidopsis lyrata (lyrate rockcress): 9314591
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Entry
9314591 CDS
T01578
Name
(RefSeq) putative RING-type E3 ubiquitin transferase C3H69 isoform X2
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9314591
Enzymes [BR:
aly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
9314591
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
9314591
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH_4
zf_CCCH_4
zf-CCCH
Torus
zf-CCCH_2
zf-RING_2
zf-C3HC4
RING_XB3-XBAT31
zf-RING_5
zf-CCCH_3
zf-RING_UBOX
zf-CCCH_9
zf-rbx1
CC4_CEP85
Motif
Other DBs
NCBI-GeneID:
9314591
NCBI-ProteinID:
XP_002876728
UniProt:
D7LTS2
LinkDB
All DBs
Position
Unknown
AA seq
353 aa
AA seq
DB search
MSKRILCKFFAHGACLKGEHCEFSHDWKDPTNNICTYYQRGICSYGSRCRYEHVKASRPH
PSASSSSPVPLSSPASASNPLARVFLPGVSERDLSPVPSSCLKPTWNLDSFHQDSLDSLD
EVNTFNPGTVKPEEQPICSFAAAGDCPRGDECPHIHGNICPTCGKCCLHPFRPEEREEHK
KVCEKKQKQLEALKISQEIECCVCLERVLSKATPAERKFGLLTECDHAFCIACIRNWRSS
SPSTGMDVNSTLRACPICRKLSYFVVPSVIWFSAPEEKKEIMDNYREKLRSIDCKHFSFG
DGNCPFGTSCFYKHAYHDGRLEEVVLRHLDAEDGQTVIAKDIRLSDFLESMHI
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaagaatcctttgtaaattctttgctcacggtgcatgcttgaaaggggagcac
tgtgaattttcgcatgactggaaggatcctacaaataatatttgcacctactaccagaga
ggaatctgctcttatggaagtcgatgcaggtacgaacatgtcaaagcttctcggccccat
ccatcggcttcatcttcgtcccctgtgcctctgtcatctcctgcttcagcttccaatcct
cttgcccgtgtttttcttcctggtgtatctgaaagagatttgagcccagttccctcttca
tgtttaaaaccaacgtggaatttggattcttttcaccaggattccttagactccttagac
gaggtcaacacttttaaccccggtacagtcaaacctgaagaacaacccatttgctcattt
gctgcagctggtgattgcccacgtggggatgaatgccctcacatccatggaaatatttgc
ccaacttgtgggaaatgttgcttgcatcctttcagacccgaggagagagaggagcacaag
aaagtatgtgaaaaaaagcagaagcagcttgaagcattaaaaattagtcaagagatcgag
tgttgtgtctgtttggaacgtgtattgtctaaggcaactccagctgaacggaagttcggg
ttactcactgaatgtgatcatgctttctgcatagcatgtatcaggaattggcggagcagt
tctccttccactgggatggatgtcaatagcacactacgggcttgccccatatgccgcaag
ttatcttattttgttgttcctagtgtgatctggttttcagctccagaagagaaaaaagaa
attatggataactacagggaaaagctcaggtcaatcgattgtaaacacttcagttttgga
gatgggaattgtccgttcgggacaagttgcttctacaagcatgcgtatcatgatggtcgt
ttggaggaagtagttttgcggcatctggatgcagaagatgggcagactgtgatagcaaaa
gatataaggttgtctgacttccttgagagcatgcacatatga
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