KEGG   Arabidopsis lyrata (lyrate rockcress): 9314696
Entry
9314696           CDS       T01578                                 
Name
(RefSeq) protein RMD5 homolog A
  KO
K23333  E3 ubiquitin-protein transferase RMND5 [EC:2.3.2.27]
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:aly00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:aly04121]
    9314696
Enzymes [BR:aly01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     9314696
Ubiquitin system [BR:aly04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   CTLH complex
    9314696
SSDB
Motif
Pfam: CTLH zf-RING_UBOX zf-C3HC4_4 zf-RING_5 zf-RING_2 zf-C3HC4_3 zf-C3HC4 Baculo_PEP_C zf-C3HC4_2 ASY3-like Prok-RING_4
Other DBs
NCBI-GeneID: 9314696
NCBI-ProteinID: XP_020885449
LinkDB
Position
Unknown
AA seq 380 aa
MELKNVKDAFDRVAKKQKLCYSKTQEVVDRLSQEINKALDTIHEDNHESVVADLKKTFEE
ISPINQLEASQKEVNGALTKYPKALDKTLNPDISTAYRNIEFDRHTVHQIIAQFFYRQGM
YEIGDSFVSEIGEPELVESSVTKAFMEMNMILEAMGKRDLGPALKWVASNSEKIKEAKSD
LELKLHSLHFLEIAKDKNSKEAINYARKHFAAYSDSCLPEIQKLMCSLLWNRNLVKSPYS
DFLSPVLWTNAAKELTRQYCKLLGESSESPLSVTVAAGSQVLPTFLKYLTVMPEKRQEWQ
TMKQLLVPVELSEEYRFYSVFVCPVSKEHSSEDNPPMRLGCGHVLCKQSINRMSRNGSRS
FKCPYCPTDIDASQCKQLYF
NT seq 1143 nt   +upstreamnt  +downstreamnt
atggagctaaagaatgttaaagatgcgtttgatcgtgttgccaaaaagcagaagctttgc
tatagcaaaacgcaggaagttgtagatagactgtctcaagaaatcaacaaggcattggat
acgatacatgaggataatcatgaatctgttgttgctgatctgaagaaaacttttgaggag
atttctccaatcaatcaactagaagcgtctcagaaagaagtaaatggtgctctgaccaaa
tatccgaaagctttggataaaactctgaatccagatatatcgacggcttatagaaacatc
gagtttgatcgtcatactgttcaccagataatagctcagtttttctacaggcaaggcatg
tatgaaattggtgatagtttcgtttctgagattggtgagcctgagcttgttgaatcttct
gttacgaaagccttcatggaaatgaatatgatacttgaagccatgggaaaacgagatctt
ggaccagctcttaagtgggtagcttcaaactctgagaagataaaggaagcaaagtcagat
cttgagttgaaacttcacagccttcacttcctggaaatagcaaaagacaaaaactccaaa
gaagctatcaactacgcgagaaaacactttgctgcatattcagatagctgtttgcctgag
attcagaaactcatgtgctctctcttatggaacagaaacctcgttaaatccccgtactca
gatttcctctcaccggtattatggaccaacgctgccaaggaactaacccgacaatactgc
aaactactcggtgaatcatcagagagccctttaagtgtaacagttgcagctggttcacaa
gttctaccgacgtttttgaaatacttaaccgtgatgccagagaaaagacaagagtggcaa
acaatgaagcaacttcttgtacctgtggaactctctgaagaatatcgcttctactcggtc
tttgtttgtcctgtctctaaagaacactctagtgaagataacccgccgatgagattaggt
tgcggtcatgtcctttgcaagcagtctatcaacagaatgtcgaggaatggatcaaggtcg
ttcaagtgtccttattgtccaacagatattgatgcttcgcagtgtaagcagttatatttt
tag

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