Arabidopsis lyrata (lyrate rockcress): 9314696
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Entry
9314696 CDS
T01578
Name
(RefSeq) protein RMD5 homolog A
KO
K23333
E3 ubiquitin-protein transferase RMND5 [EC:
2.3.2.27
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9314696
Enzymes [BR:
aly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
9314696
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
CTLH complex
9314696
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CTLH
zf-RING_UBOX
zf-C3HC4_4
zf-RING_5
zf-RING_2
zf-C3HC4_3
zf-C3HC4
Baculo_PEP_C
zf-C3HC4_2
ASY3-like
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
9314696
NCBI-ProteinID:
XP_020885449
LinkDB
All DBs
Position
Unknown
AA seq
380 aa
AA seq
DB search
MELKNVKDAFDRVAKKQKLCYSKTQEVVDRLSQEINKALDTIHEDNHESVVADLKKTFEE
ISPINQLEASQKEVNGALTKYPKALDKTLNPDISTAYRNIEFDRHTVHQIIAQFFYRQGM
YEIGDSFVSEIGEPELVESSVTKAFMEMNMILEAMGKRDLGPALKWVASNSEKIKEAKSD
LELKLHSLHFLEIAKDKNSKEAINYARKHFAAYSDSCLPEIQKLMCSLLWNRNLVKSPYS
DFLSPVLWTNAAKELTRQYCKLLGESSESPLSVTVAAGSQVLPTFLKYLTVMPEKRQEWQ
TMKQLLVPVELSEEYRFYSVFVCPVSKEHSSEDNPPMRLGCGHVLCKQSINRMSRNGSRS
FKCPYCPTDIDASQCKQLYF
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggagctaaagaatgttaaagatgcgtttgatcgtgttgccaaaaagcagaagctttgc
tatagcaaaacgcaggaagttgtagatagactgtctcaagaaatcaacaaggcattggat
acgatacatgaggataatcatgaatctgttgttgctgatctgaagaaaacttttgaggag
atttctccaatcaatcaactagaagcgtctcagaaagaagtaaatggtgctctgaccaaa
tatccgaaagctttggataaaactctgaatccagatatatcgacggcttatagaaacatc
gagtttgatcgtcatactgttcaccagataatagctcagtttttctacaggcaaggcatg
tatgaaattggtgatagtttcgtttctgagattggtgagcctgagcttgttgaatcttct
gttacgaaagccttcatggaaatgaatatgatacttgaagccatgggaaaacgagatctt
ggaccagctcttaagtgggtagcttcaaactctgagaagataaaggaagcaaagtcagat
cttgagttgaaacttcacagccttcacttcctggaaatagcaaaagacaaaaactccaaa
gaagctatcaactacgcgagaaaacactttgctgcatattcagatagctgtttgcctgag
attcagaaactcatgtgctctctcttatggaacagaaacctcgttaaatccccgtactca
gatttcctctcaccggtattatggaccaacgctgccaaggaactaacccgacaatactgc
aaactactcggtgaatcatcagagagccctttaagtgtaacagttgcagctggttcacaa
gttctaccgacgtttttgaaatacttaaccgtgatgccagagaaaagacaagagtggcaa
acaatgaagcaacttcttgtacctgtggaactctctgaagaatatcgcttctactcggtc
tttgtttgtcctgtctctaaagaacactctagtgaagataacccgccgatgagattaggt
tgcggtcatgtcctttgcaagcagtctatcaacagaatgtcgaggaatggatcaaggtcg
ttcaagtgtccttattgtccaacagatattgatgcttcgcagtgtaagcagttatatttt
tag
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integrated database retrieval system