Arabidopsis lyrata (lyrate rockcress): 9314897
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Entry
9314897 CDS
T01578
Name
(RefSeq) two-component response regulator ARR12
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
9314897
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aly03000
]
9314897
Transcription factors [BR:
aly03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
9314897
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
KaiA_N
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
9314897
NCBI-ProteinID:
XP_002880659
UniProt:
D7LK57
LinkDB
All DBs
Position
Unknown
AA seq
611 aa
AA seq
DB search
MTVEQNFEALDQFPVGMRVLAVDDDQTCLKILETLLRHCQYHVTTTNEAQKALELLRENK
NKFDLVISDVDMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKFVMKGVTHGACDYLLKPV
RIEELKNIWQHVVRSRFDKNRGSNNGDKRDGSGNEGVGYSDQNNGRANRKRKDQYNEDDD
EEKDDNDDSSAQKKQRVVWTVELHKKFVAAVNQLGYEKAMPKKILDLMNVEKLTRENVAS
HLQKFRLYLKRISGVANQQAIMANSDLHFLQMSSSLNGLDGFNHRPIPVGSGQFHGGAPA
MRSFTPNEILGRLNTPSGIGVRNLSSPPAGMFLQNQTDLGKFHHVSSLPLNHSDGGNILP
GLPLPLEFDQLQTNNNNNNNNIRNMNNNKSIAGTSMAFPSFSTQQNSIIGAPNNNLVVLE
GHPQSSPPGFPGHQINKRLEHWSNAVSSSTLPPPAQNSNSINRQFDVSPLPQSRPDTLEW
NNVSSSYSIPFCDSATTLSPPALDTTNPRAFCRNMDFDSSTNAQPGCFYDTLQTRQSGNY
GPTTDAMLSSSNPKEGFVVGQQKLQSGGFMSAEAGSLDDIVNSTMKQEQSQGDLSGGDLG
YGGFSSLRTCI
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgactgtggaacaaaattttgaagctttggatcagtttcctgtaggaatgagagttctt
gctgttgatgatgaccaaacttgtctcaaaatccttgaaactcttcttcgtcactgccaa
taccatgttacaacgacgaacgaagcacaaaaggctttagagttattgagagagaacaag
aacaagtttgatctggttattagtgatgttgacatgcctgacatggatggtttcaaactt
cttgagcttgttggtcttgaaatggacctacctgtcataatgttgtctgctcatagtgat
ccaaagtttgtgatgaaaggagttacccatggtgcttgtgactatttgttgaagccggtt
cgtattgaggagctgaagaacatatggcaacatgtggtgagaagtagatttgataagaac
cgtgggagtaataacggtgacaagagagatggatcgggtaatgaaggtgttggatattct
gatcagaacaatgggagagctaatagaaaacgtaaagatcagtataatgaagatgatgat
gaggaaaaagatgataatgatgattcgtcggctcaaaagaagcaacgtgttgtttggacc
gtcgaattgcataagaaatttgttgcagcagttaaccaattgggatatgagaaggctatg
cctaaaaagattttggatctgatgaatgttgagaagctcactagagaaaatgtggctagt
catcttcagaaattccgcctttacttgaagaggatcagtggtgtggctaatcaacaagct
attatggcaaactctgatttacattttttgcaaatgagttcttctctcaatggacttgac
ggtttcaaccaccgcccaatccctgttggatctggtcagttccatggtggggctcctgca
atgagatctttcactccaaatgagattcttggccgactcaatactccttcggggatcggt
gtccgcaacctttcttctcctcctgcaggaatgttcttgcaaaaccagaccgatcttgga
aagtttcaccatgtctcatcacttcctcttaaccacagtgatggaggaaacatacttcca
gggttgccactgcctttagagttcgaccagcttcagacaaacaacaacaacaacaacaac
aacattagaaacatgaacaataacaagagcatcgccgggacttccatggcttttcctagc
ttctctactcaacaaaactcgatcatcggtgctcctaataacaatctcgtggttctagaa
ggtcacccacaatcatctcctccaggctttccgggacaccagatcaataaacgtttggag
cattggtcaaacgctgtatcctcgtcgactcttcctcctcctgcccagaacagtaatagt
atcaatcgtcagtttgatgtctctccattaccgcagtctagacccgacactttggaatgg
aacaatgtgtcatcaagctactctataccattctgtgactctgccactacattgagtcct
cctgccttggatacaacaaatccccgagctttctgcagaaacatggacttcgattcaagc
acaaatgcgcaacctggatgcttttatgataccttgcagactcggcaatcaggcaattat
ggtccaaccacggatgctatgttgagtagtagtaacccgaaagaagggttcgtcgtaggc
cagcagaagttacagagtggcggattcatgagtgcagaagctggttccttagatgatata
gtcaactccacaatgaagcaggaacagagccagggagatttgtctggaggagatttggga
tatggagggtttagttcactcagaacatgcatatga
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