Arabidopsis lyrata (lyrate rockcress): 9314964
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Entry
9314964 CDS
T01578
Name
(RefSeq) nuclear poly(A) polymerase 2 isoform X4
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
9314964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
9314964
Enzymes [BR:
aly01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
9314964
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
9314964
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
9314964
NCBI-ProteinID:
XP_002880715
UniProt:
D7LC01
LinkDB
All DBs
Position
Unknown
AA seq
788 aa
AA seq
DB search
MVSSTQQRTDDGSSPPVVKALKTYGITKPLSIAGPCAADVKRNLELEKFLVDEGLYESKE
ETMRREEVLVRIDQIVKHWVKQLTRQRGYTDQMVDDANAVIFTFGSYRLGVHGPRADIDT
LCVGPSYVNREEDFFIILRDMLAEMEEVTELQPVTDAHVPVMKFKFQGISIDLLYASISL
LVIPQDLDISNSSVLCDVDEQTVRSLNGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRG
VYSNVTGFLGGVNWALLVARLCQLYPNAIPSMLVSRFFRVYIQWRWPNPVMLCTIEEDEL
SFPVWDPRKNHRDRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNK
QQWSSLFEQYMFFEAYKNYLQVDVLALDAEDLLAWKGWVESRFRQLTLKIERDTNGMLMC
HPQPNEYVDTSKKFRHCAFFMGLQRAEGFGGQECQQFDIRGTVDEFRQEVNMYMFWRPGM
DVYVSHVRRRQLPSFVFPKGYKRPRQSRHQNQQCREPGEGVVGSLSDSVDGYAKRKNDNE
TMDTRPEKREKRASRSPHSLDAVSPVSSGITTGETPQIGIAPGPRAECLVTGDLVCNVRS
LPNVEVEAEKFIRKSTELIKFSQYEHNSGCEQILEVDSRALVQGYHGLAEPVGKHVRPDP
RAVLACEGWQNKEIGRDMGSESINDTATQHLPRRLNVKEDVDEVEREAKSGEIADGVLWN
GYCGRNLDHEGFLTPANLDSAVEHRNLHADRLFKSGLSEELQSNPLLSGMGKLDDGASSR
RLSLKSIV
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggtgagtagtactcaacaacgcacggacgatggctcttctccaccggtggtaaaagct
cttaagacctatggaatcacgaagccactttctattgctggtccttgtgccgctgatgtt
aagcgtaatttggaactagagaagtttctggttgatgaggggctctatgagagcaaggaa
gaaactatgcggagagaggaagttctggtgcgcattgatcagattgtaaaacactgggtg
aaacagttaactcgtcagaggggctatacagatcagatggtggacgatgcaaatgctgtc
attttcacttttggatcttaccgccttggagttcacggacctagggctgatattgatact
ttgtgtgttggcccatcttatgttaaccgagaggaggatttcttcattatcttgcgtgat
atgttggctgaaatggaagaagtgactgaacttcaacctgttactgatgcccatgtccca
gtcatgaaatttaagttccaaggaatatcgattgatcttctgtatgctagcatatcactt
ctagttatcccacaggatctggatatctccaactcttctgtgctgtgtgacgtggatgaa
caaactgtccgcagtcttaatggttgtagggttgctgatcagattcttaaactcgttcca
aattccgagcacttccggacaacattaagatgcctgaagtactgggctaagaagcgtggg
gtctattcaaatgttactggatttcttggtggtgtaaactgggcacttctggttgcacgc
ctgtgccagctttatccaaatgctattcctagtatgttggtttcgcgattttttagagta
tatatacaatggcgctggccgaatccagtcatgctttgtacaatagaagaagatgagctt
agctttcctgtctgggacccacggaaaaatcatcgtgaccgctatcatcttatgccaata
ataactcctgcatacccatgcatgaattctagttacaatgtctctcaaagcacacttcgt
gttatgacagagcaattccagtttggcaacacgatctgtcaggagattgagctaaataaa
caacaatggagttccttatttgagcaatatatgttctttgaggcatataaaaactacctt
caggttgatgtactagcattagatgccgaagatttattggcatggaaaggttgggtggag
tcacggttcaggcaattgaccttgaagatagaacgagacacaaatgggatgttaatgtgc
caccctcaaccaaatgagtatgtagacacttcgaagaagtttcgacattgtgcctttttc
atgggcttgcagagggcagaaggatttggtggccaagaatgtcaacagttcgatatacgt
ggaacagtggacgagttcaggcaagaagtaaacatgtatatgttttggagacctgggatg
gatgtgtatgtttctcatgttcgaagacggcagcttccatcttttgttttcccaaaggga
tataaaaggcctcggcagtcaaggcaccagaatcaacaatgcagagaacctggtgagggg
gtcgttggttctttgtccgactctgttgatggatatgcgaagagaaagaatgataatgaa
actatggatacccggccagagaaacgtgagaagcgtgcatctcgtagtccacatagtctg
gatgcagtttctcctgtcagcagtggtatcactactggtgagactcctcagattggcatt
gcgccaggtcctagagctgaatgcttagtaactggtgatcttgtttgcaatgttagaagt
cttcctaacgtggaagtcgaggctgaaaaatttatccgtaaaagcacggaactcataaaa
ttttctcaatatgagcataactccggttgcgagcaaatcctggaagtagatagtagggct
ctagttcaaggttatcatggtctggctgagcctgtaggaaaacatgtgagacctgaccct
cgtgctgtgctagcatgtgaaggttggcagaataaagaaataggtcgtgatatgggctct
gaatctattaatgacactgccacacaacatcttccaaggcgacttaatgtaaaagaagat
gttgatgaagttgagagggaagccaagtcgggagaaattgctgatggtgttttgtggaat
ggatactgtgggcggaaccttgatcatgagggttttttgactcctgcaaatttggattca
gctgtggaacatagaaacttgcatgcagacagattgttcaaaagtggcttgtcagaagaa
cttcagtcaaatcctttgctcagcgggatggggaagctggacgatggagctagcagcagg
aggttgagcttgaagtccatagtgtga
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integrated database retrieval system
