Arabidopsis lyrata (lyrate rockcress): 9315060
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Entry
9315060 CDS
T01578
Name
(RefSeq) uncharacterized protein LOC9315060 isoform X1
KO
K14827
pre-rRNA-processing protein IPI1
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
9315060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aly03009
]
9315060
Ribosome biogenesis [BR:
aly03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
9315060
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT
TOR1L1_N
Ipi1_N
Motif
Other DBs
NCBI-GeneID:
9315060
NCBI-ProteinID:
XP_002878993
UniProt:
D7LE88
LinkDB
All DBs
Position
Unknown
AA seq
872 aa
AA seq
DB search
MVRSKAPAKKQQIDFKKIKRKLGRKLPPPKNATNTEIKSKAIIIPEQSVAAEKTGFATSN
KNLTLEELLVRSRHPNAKVRKNALLGIQDLLKSHPVELQSKKYTIIQCLKGRVNDDDKQV
RKAFYELFETQIFRVCKQEDIKGLMVSPLMLSIFHAMANSLIDVRLDAFAFLHLVVDYYP
PSFSMYPEEILENYKDIIIQSNHFYVQDKTNLKVALSGLSHCLSLLPYDEIHTKSQKKHF
QQIETLLAYEQDAAKEGFAHVSVRLKEIVGALINCFQDFIQLLCAPRGLDPQSLIDCVHH
ILCSICCAIKFSHTQTHTATEEEEVTLMKLDHHISSMLSKKLLASFPLIPKIYLSKRNDE
SYFILNGVLTEIFLEVSEWSHLPCDLSYRFLEFIENTLLGKIIRSISPPIHEKALLLLVP
FVPKLTLRVDRDWRDKLMQAFTITLSDCKPESPLQLACISIVRELIIPNGNILYPNDPTV
DNYQLAWVNKLPSLLHQLGDKNPVSTQVVLQLLLDLGRVGFLKNTSPAFEEDVRNFFNPY
QGEGDVPGGPFASLPREAQELALSFLYYFTIDHFSSPMLKAIVSCCLYEQLKPAVLYRIV
EILHTAYRDGYIQITDHFSFFITLIARFKVVPPEMGIECDERRETTFKALTNLVCSCLSG
MGDSSLVLQILEKAFVEQIGKYFILKPALDNGCGILRMICTLDSKPTRLSESSVTTLSEF
LPGYLMDIVNCIPEDKEKSSYLYIQTCLYYLVPCFLLFDRSSKLTEEVLKRLRLMVSEYT
KAMLESPVWESSRNLLNLIQCIVSVILLMHNDVRVRKIISSFKSEIDLILHSVVTLQSSS
MTVEGKHMMKIAGERLRIASNSLVSCTTVTIE
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggttcgctccaaagctcccgcgaagaagcagcaaattgatttcaagaaaatcaagcga
aagctggggagaaaattacctccaccaaaaaatgcaactaacacagagattaaatccaaa
gcaattataattcctgagcaaagtgtggcagcagaaaagactggctttgctacaagtaat
aaaaacttgaccttggaggagcttctagtacgaagtcgtcatcccaatgctaaagttcgc
aaaaatgcgttgcttggtatccaagaccttttaaaaagtcatccagtagagctgcagtca
aagaaatatactatcatacaatgtcttaagggacgcgttaatgatgatgataagcaagtg
agaaaagctttttatgaactatttgagactcagatctttcgtgtttgtaaacaagaggat
atcaagggacttatggtgtcacctttgatgctatccatatttcacgctatggctaattca
ttgattgatgttcgtttggatgctttcgcttttttacaccttgttgtggactactacccg
ccttcattttccatgtatcctgaagagattcttgaaaactacaaggatatcattattcag
agcaaccatttttatgtgcaagataaaactaatctaaaggtagctctttccgggttgtca
cattgcctctcgctgttgccatatgatgagatccacaccaaatcacagaaaaagcatttc
caacaaattgaaaccctactcgcctatgagcaagatgctgcaaaagaaggttttgcccac
gtctctgtgagattgaaggagattgttggagccttaatcaattgtttccaagatttcatt
caactgctttgtgctccacgaggattggatccacaatcattaattgattgcgtgcaccat
atcctctgcagcatatgttgtgccatcaagttttcgcacactcagacacatactgcaact
gaagaagaagaagttactctgatgaaactcgatcaccacatttcatcaatgttatcaaaa
aagttacttgcttcttttccccttattcccaaaatctacctttctaaaaggaatgatgaa
agctactttatcctcaacggtgtattgactgaaatctttttggaagtaagtgaatggagc
caccttccttgtgacctttcctatagatttctggaatttattgagaataccctactaggc
aagatcatcaggagcattagtccacctattcacgaaaaagctttgcttttactcgtgcct
tttgttccaaaacttactttgagggtggaccgtgattggagagataaactgatgcaggcg
ttcactattactttaagcgattgcaaaccagagtctccacttcaattagcctgcatttca
attgttagagaactgattatccctaatggaaatatcctttatcccaatgatccaaccgta
gataactaccagcttgcttgggtcaacaaacttccgtcactgcttcatcagttgggtgat
aagaatcccgtttctacccaggttgttttgcaacttttgcttgaccttgggcgagttggg
tttctgaagaatacttcccctgcatttgaagaagacgtcagaaacttcttcaacccttat
cagggagaaggtgatgtgcctggtggaccatttgcaagtctccctagggaagcccaagaa
cttgctctctctttcctttactacttcaccatagaccatttcagttcccctatgctgaaa
gcaatagtttcatgctgtttatatgaacaacttaaaccagctgtgttgtatcggatagtg
gaaattcttcacactgcgtatagagatggatatattcagattacagatcattttagcttc
ttcatcactctaattgcgcgtttcaaagttgtccctccagagatggggatcgagtgtgat
gagcggcgggagacaacattcaaagcacttacaaaccttgtgtgctcatgtttgtcagga
atgggtgatagctctcttgtcctccagattctagagaaagcttttgtcgaacaaataggc
aaatactttattttgaaacctgctttggacaatgggtgtggcatactcaggatgatctgc
acgttggactctaaacccaccagactttctgaaagcagcgtaaccactctaagtgaattc
ttgccggggtatttgatggatatagtcaattgtatacccgaagataaggagaagtcttct
tacctttacatacaaacatgtctctactatttagtaccttgctttttgctgtttgaccgg
agctccaaactcacagaagaggttctgaaaagattgcgattgatggttagtgaatacact
aaagcgatgctggaatcaccggtctgggagagcagtcgaaacttgttgaatttgatacaa
tgcattgtctctgtgatcctgctgatgcacaacgacgtcagagttaggaagataatatca
tcattcaagtcggagattgatttgattctgcacagcgttgtcacgttgcagtcctcgagc
atgacagtagaaggaaagcatatgatgaagattgcaggagagcgacttaggattgcatcc
aatagcttagtaagttgtacaactgtgacaatagaataa
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