Arabidopsis lyrata (lyrate rockcress): 9315134
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Entry
9315134 CDS
T01578
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aly03036
]
9315134
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
aly00535
]
9315134
Chromosome and associated proteins [BR:
aly03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
9315134
Meiosis-specific proteins
Cohesin complex and associated proteins
9315134
Proteoglycans [BR:
aly00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
9315134
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
ATG14
AAA_29
Microp_apicomplexa_7
Motif
Other DBs
NCBI-GeneID:
9315134
NCBI-ProteinID:
XP_020883848
LinkDB
All DBs
Position
Unknown
AA seq
1201 aa
AA seq
DB search
MYIKQVIIEGFKSYKEQVATEDFSNKVNCVVGANGSGKSNFFHAIRFVLSDIFQNLRSED
RHALLHEGAGHQVVSAFVEIVFDNSDNRFPVDKEEIRLRRTVGLKKDDYFLDGKHITKGE
VMNLLESAGFSRANPYYVVQQGKIASLTLMKDIERLDLLKEIGGTRVYEERRRESLKIMQ
ETGNKRKQIIEVVHYLDERLRELDEEKEELRKYQQLDKQRKSLEYTIYEKELHDAREKLE
QVEVARTKASEESTRMYDRVEKAQDDSKSLDESLKELTKELQMLYKEKETVEVQQTEAIE
KKTKLELDVKDFQDRITGNFQSKNDALEQLITVEREMKDSERELEAINPLYASYLDKEKQ
ASKRINELEKQLSILYQKQGRATQFSSKAARDKWLRKEIEDLKRVLDSNMVQEHKLQDEI
LRLKTDLIERDEHIKKHEVKIGELESHISKSHELFNTKKRERDEEQRKRKEKWGEESQLS
SEIDKLKTELERAKKNLDHATPGDVRRGLNSIRRICSEYRINGVFGPLVELVDCDEKFFT
AVEVTAGNSLFNVVVENDDISTKIIRHLNSLKGGRVTFLPLNRIKAPRVNYPKDSDAIPL
LRKLKFDSKFEPALGQVFGRTVVCRDLNVATRVAKNDDLDCITMEGDQVSRKGGMTGGFY
DHRRSKLRFMNIIMQNTKSINEKEKELEDVKRQLQVIDQQITQLVTEQQRLEADWTLCKL
QVEQLKQEIANANKQKDAIHKAIENKKKSLGDIGTRIDQVRSSMSMKEAEMGTELVDHLT
PEERVQLSQLNPQIKDLKEKKFAYQADRIERETRKAELEANIATNLKRRITELKATIASI
DDDSLPSSAGIKEQELDDAKLLVNEAAKELKSVCDSIDEKTKQVKKIKDEKAKLKTLEDD
CKGTLQDLDKKLEELFSLRNTLLAKQDEYTKKIRGLGPLSSDAFDTYKRKNIKELQKMLH
RCSEQLQQFSHVNKKALDQYVNFTEQREELQNRQAELDAGDEKIKELITVLDQRKDESIE
RTFKGVAHHFKDVFSELVQGGYGNLVIMKKKDLDDEDDDDDDGGQAVAEGRIEKYIGVKV
KVSFTGQGETQSMKQLSGGQKTVVALALIFAIQRCDTAPFYLFDEIDAALDPQYRTAVGN
LIRRLADDYGTQFITTTFRPELVRVADKIYGVFHKNRVSIVNVITKDQALDFIEKDQSHD
T
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgtatatcaagcaggttattatcgaaggatttaagagttacaaagagcaagttgctact
gaggattttagtaacaaggtcaattgtgttgttggagcaaatgggtctgggaaaagcaat
ttcttccatgcaattcgttttgtattgagtgacatcttccaaaatctgcggagtgaagat
aggcatgcattactccacgaaggtgctggtcatcaagtcgtgtctgcgtttgtggagatt
gtgtttgataattctgacaaccggttcccggttgataaggaagaaatacgcttgcgccga
acggttggcctgaagaaggatgattatttcttggatgggaaacacattacaaaaggtgaa
gttatgaatttattggagagtgctggattttctcgtgctaatccttactatgttgttcaa
caaggaaagatagcctcgttaacactgatgaaagacatagaacggctggatctgctaaaa
gagataggtggtactcgtgtttatgaggagaggcgtcgtgagagtttaaaaattatgcag
gaaacaggaaataaacggaagcagatcatcgaagttgtccactacttggatgaaagacta
agagaactggacgaagagaaagaagaactcagaaaatatcaacaacttgacaagcagaga
aaatcactggaatacaccatttacgaaaaagagcttcacgatgctcgggagaaactggaa
caggtagaagttgcaagaactaaggcatctgaagagtctacaagaatgtatgatagagtt
gagaaggcccaggacgactccaagtccttagatgagtccctgaaagagctgacaaaagag
cttcagatgttatacaaggagaaagaaactgttgaagttcaacaaactgaagctatagag
aagaagacaaagctggagcttgatgtgaaggactttcaggatcgaattactggaaatttt
cagtctaagaatgatgcacttgagcaacttattacggtggaaagagaaatgaaggattct
gagagggaactggaggcaattaatcctttgtatgcaagttatcttgacaaggagaagcag
gcatcaaaaagaatcaatgagctggaaaaacaacttagcattctatatcagaaacaggga
cgtgcaactcaattttcaagtaaggctgcccgagataaatggctcaggaaagagattgag
gatcttaagcgtgttctagactcaaatatggttcaagagcacaaacttcaggatgaaatt
cttcgcctcaaaactgacttgatagagcgtgatgagcacatcaagaaacatgaagtgaaa
attggtgaactggaatctcatatttccaagtcccatgaactattcaatactaaaaagaga
gagagagatgaagaacaaagaaaaagaaaggaaaaatggggagaagaaagtcaactttct
tctgagattgacaagttgaaaacggaacttgaacgggcaaagaaaaaccttgatcatgca
actccaggggatgtaaggagagggctgaactctattcgacggatttgttcagagtatagg
atcaatggagtttttggtccacttgttgagttggttgattgcgatgaaaagtttttcact
gcagttgaagtcactgctggaaacagcctatttaacgtggtagttgagaatgatgatatt
tcaaccaagataattagacacctgaattctctcaagggtggacgagtgaccttcctacct
ctgaatcggataaaggcgcctcgcgtcaactatccaaaagattctgatgcaataccactg
ttgagaaagttaaagttcgactctaagtttgaaccggcattgggtcaggtttttggtaga
acagtagtatgtcgtgatctgaatgtggcaacaagagttgctaagaatgatgacctcgat
tgtataactatggaaggtgaccaggtaagcagaaagggtggtatgaccggtggattctat
gaccacaggcggtcaaaattgagattcatgaatattataatgcaaaatacaaagtctata
aatgagaaggagaaggaactggaggatgttaaaaggcagctccaagtgatagatcagcag
attacacagcttgttactgagcagcagagacttgaagcagactggacgctctgcaaatta
caggtggagcaacttaagcaagagatagctaacgctaataagcagaaagatgctatacat
aaagccattgaaaataagaaaaaatcactaggtgatattggaacacggattgaccaggtc
agatccagcatgtctatgaaagaagctgaaatgggaacagaacttgtggatcacctaact
ccagaagagagggtgcaattgtcgcaattaaacccacaaatcaaggatcttaaggaaaaa
aaatttgcataccaggcagatcgcattgagagggagacaagaaaagcagagttggaggct
aatattgctaccaacttaaagaggagaataactgagttaaaggctactatagcttccatc
gacgatgatagtttgcctagttcagctggcataaaagaacaagagcttgatgatgcaaaa
ttgttggtcaatgaggccgcaaaagagctcaaaagtgtctgtgacagcattgatgagaag
acgaagcaagtcaagaaaattaaagatgagaaagcaaagttaaagacattggaagatgat
tgtaagggcacactacaagatttagataaaaagttggaggaactatttagccttcgcaac
acactccttgctaagcaagatgagtatactaagaagattaggggattgggtccattgtca
tctgacgcttttgacacgtataaacggaaaaatataaaggagctgcagaaaatgctacac
cggtgcagtgaacagctgcaacaatttagccatgtaaacaagaaagcgctggatcaatat
gtgaatttcacagaacagcgagaagaacttcaaaatcggcaagcagagcttgatgcagga
gatgagaaaattaaagagctgataacagttctggatcagcggaaagatgaatcaatagaa
cgtactttcaaaggggttgcacatcacttcaaggatgtattctctgagcttgtgcaaggt
ggatatggtaaccttgtcattatgaagaaaaaggatcttgatgatgaagatgatgatgat
gatgatggaggtcaagctgttgcagagggaaggattgagaaatacattggtgtaaaagtg
aaggtctcattcactggtcaaggtgaaacacaatcgatgaaacaattgtcgggaggccaa
aagactgttgttgccctcgcattaatctttgcaatccagcgatgtgataccgcaccattc
tatctttttgatgagattgacgcggcacttgatccacagtaccgaaccgctgtaggaaac
ttgattcgtcgtctagctgatgattatggcacgcagttcataaccacaacattccgtcct
gagctagtgagagttgcggataagatatatggagtatttcataagaacagagtgagtatt
gtgaatgttatcacaaaggatcaggcgttggactttatcgagaaagatcagtcccacgat
acctga
DBGET
integrated database retrieval system
