Arabidopsis lyrata (lyrate rockcress): 9315175
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Entry
9315175 CDS
T01578
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 15
KO
K05391
cyclic nucleotide gated channel, plant
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
9315175
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aly04040
]
9315175
Ion channels [BR:
aly04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
9315175
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
9315175
NCBI-ProteinID:
XP_002880939
UniProt:
D7LID3
LinkDB
All DBs
Position
Unknown
AA seq
678 aa
AA seq
DB search
MGYGNSRSVRFQEDQEVVHGGESGVKLKFKINGTQIKNMKMMSKGKFLKDKVLSRVFSED
LERVKTKILDPRGQTIRKWNKIFLIACLVSLFVDPLFFFLPVMRNEACITIGVRLEVVLT
LIRSLADAFYIAQILIRFRTAYIAPPSRVFGRGELVIDSRKIAWRYLHKSFWIHLVAALP
LPQVLIWIIIPNLRGSPMTNTKNVLRFIIIFQYVPRMFLIFPLSRQIIKATGVVTETAWA
GAAYNLMLYMLASHVLGACWYLLAVERQEACWRHACNIEKVVCQYRFFECRRLEDPQRNS
WFEWSNITTICKPGSKFYEFGIFGDAVTSTVTSSKFINKYFYCLWWGLKNLSSLGQNLAT
STYAGEILFAIIIATLGLVLFALLIGNMQTYLQSTTMRLEEWRIRRTDTEQWMHHRQLPP
ELRQAVRKYDQYKWLATRGVDEEALLISLPLDLRRDIKRHLCFDLVRRVPLFDQMDERML
DAICERLKPALCTEGTFLVREGDPVNEMLFIIRGHLDSYTTNGGRTGFFNSCLIGPGDFC
GEELLTWALDPRPVVILPSSTRTVKAICEVEAFALKAEDLQFVASQFRRLHTKQLRHKFR
FYSHQWRTWAACFVQAAWRRHRKRKYKTELREKEEFHYRFEAATARLAVNGGKYTRSGSD
SGMMSSIQKPVEPDFSSE
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgggttatggtaactcaagatctgtgagatttcaagaagatcaagaagttgttcatgga
ggagaatctggagttaagcttaagttcaaaatcaatggaactcaaataaagaatatgaag
atgatgagtaaaggaaagttcttgaaagataaagtactctcaagagtgttttctgaggat
cttgagagagtaaaaaccaaaatactcgatcctcgtggacaaacgataagaaaatggaac
aagatttttctcatagcatgtttggtttctttatttgtcgaccctttgttttttttctta
ccggtcatgagaaatgaagcgtgtatcactattggagtcagacttgaagtggttcttaca
cttataagatctttagctgatgctttttacatcgctcagattcttatacgttttagaaca
gcttatatcgcacctccttctcgtgtattcggtagaggtgagcttgtgattgattcaaga
aagattgcttggagatatcttcataaaagcttttggattcatttggttgctgctttacca
ttacctcaggttttgatttggatcataatcccaaatctaagaggctcaccaatgacaaac
accaagaatgttcttagattcatcatcattttccagtatgttccaaggatgttcttaata
ttcccgctatctcgccagatcattaaagccaccggtgttgtaacagagaccgcatgggca
ggagccgcctacaaccttatgttatatatgctagcaagccatgttttaggagcttgttgg
tatttgcttgcggtagagaggcaagaggcttgttggagacatgcttgcaacatcgagaaa
gtggtttgtcaataccgattctttgagtgtagaagactggaagatccgcaaaggaactct
tggtttgaatggagcaatataacaacaatatgcaaaccaggaagcaagttttacgagttt
ggtatattcggagatgcagtaacatcaactgttacttcatcaaagtttataaacaagtac
ttttactgtctctggtggggcttgaagaacctcagctctttgggacaaaacctcgctacg
agcacttacgctggcgaaatccttttcgccatcatcattgcgactctcgggcttgttttg
tttgcattgcttattgggaatatgcagacatatttacagtcaacaacaatgagactggaa
gagtggaggataagaaggacagatacagaacaatggatgcatcatagacagcttccacca
gagctaaggcaagccgtaagaaaatatgatcaatacaagtggctagcgacacgaggagtc
gatgaagaagctttattgataagtcttcctcttgatctccgaagagatatcaaacgccat
ctctgtttcgatcttgttcgccgtgtaccattgttcgatcaaatggacgaaagaatgctt
gacgcgatctgcgagagactaaaaccagcattatgcacggaaggaacgtttcttgtaaga
gaaggcgacccagttaacgaaatgctcttcatcattagaggccatttagattcctacaca
accaatggaggcagaaccggattcttcaactcttgtctcataggaccaggcgatttctgc
ggcgaagagttacttacatgggcactagatcctcgtcctgttgtgatcttaccgtcttcc
acacgcaccgttaaagccatttgcgaagttgaagcctttgcattgaaagctgaagattta
caatttgtggcttcacagtttagaagactacacactaagcaattgagacataagtttcgg
ttttattctcatcaatggaggacttgggcggcttgttttgtacaagctgcttggagacgg
cacaggaagaggaagtacaagactgagctgagggaaaaagaagagtttcactataggttc
gaggctgcgacggctaggctagccgtgaacggcgggaagtatacgcgtagtggttcggat
tctggtatgatgtcttcgattcaaaaaccagtagaaccagatttttctagtgaatga
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