Arabidopsis lyrata (lyrate rockcress): 9315424 Help Entry 9315424           CDS       T01578                                  Name (RefSeq) DNA repair protein RAD50   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism aly  Arabidopsis lyrata (lyrate rockcress) Pathway aly03440   Homologous recombination aly03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:aly00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     9315424    03450 Non-homologous end-joining     9315424  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:aly03032]     9315424    03400 DNA repair and recombination proteins [BR:aly03400]     9315424 DNA replication proteins [BR:aly03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     9315424 DNA repair and recombination proteins [BR:aly03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      9315424     BRCA1-C complex      9315424    NHEJ (non-homologous end-joining)     MRX complex      9315424 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  AAA_23 AAA_15 SbcC_Walker_B AAA_21 Rad50_zn_hook SMC_N AAA_29 ABC_tran Motif Other DBs NCBI-GeneID:  9315424 NCBI-ProteinID:  XP_020884073 LinkDB All DBs Position Unknown AA seq 1316 aa AA seqDB search MSTVDKMLIKGIRSFDPENKNVVTFFRPLTLIVGANGAGKTTIIECLKVSCTGELPPNAR SGHSFIHDPKVAGETETKAQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDESNWPLQDPSTLKKKFDDI FSATRYTKALEVIKKLHKDQAQEIKTFKLKLENLQTLKDAAYKLRESIAQDQERTESSKV QMLELETSIQKVDAEVHNKEMMLKDLRKLQDQVSRKTAERSTLFKEQQRQYAELPEENED TIEELKEWKSKFEERIALLETKIRKMEREMDDTATTIYSLHNAKTNYMLEISKLQTEAEA HMLLKNERDSTIQKIFSHHNLGNVPSTPFGTEVVLNLTNRIKSRLGELEMDLLDKKKSNE TALSTAWDCYMDANDRWKSIEAQKRAKDEIKMGISKRIEEKEIERDSFEFEISTVDVKQT DEREKQVQIELERKTKQNSELGFESKIEQKQHEIYSMEHKIKTLNRERDVMAGDAEDRVK LSLKKTEQENLRKKHKKIIDECKDRIRGVLKGRLPPEKDMKKEIVQALRSIEREYDDLSL KSREAEKEVNMLQMKIQEVNNSLFKHNKDTESRKKYIESKLQALKQESVTIDAYPKLLES AKDERDDRKSKYNMANGMRKMFEPFEDLARQHHYCPCCERSFTTDEENSFVKKQRVKAST TGEQLKKLAVESSNADSVFQQLDKLRAVFEEYSKLTSEIIPLAEKSLQEHTEELGQKSQA LDDVLGISAQIKADKDSIEALVHPLENADRTFQEIVSYQKQIEDLEYKLDFRGLGVKTME EIQSELSSLQSSKDKLHGELEKLRDDQIYMERDISCLQARWHAVREEKAKAANLLRDVTK AEEDLERLAEEKSQLDLDVKYLAEALGPLSKEKEQLLSDYNDMKIRRNQEYEELAEKKRN YQQEVEALLKASSKINEYHDLKKGERLNDIQEKQRLSESQLQSCEARKNELAGELNRNKD LMRNQDQLRRNIEDNLNYRTTKAKVEELTREIESLEEQILNIGGIPAVEAEIVKILRERE RLLSELNRCRGTVSVYESSISKNRVELKAAQYKDIDKRHFDQLIQLKTTEMANKDLDRYY NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDMDYIRIHSDSEGAGTRSYSYKVLMQT GDTELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNSESLAGALL RIMEDRKGQENFQLIVITHDERFAQMIGQRQHAEKYYRVAKDDMQHSIIEAQEIFD NT seq 3951 nt NT seq  +upstreamnt  +downstreamnt atgagtacggtcgataaaatgctgatcaagggcatcagaagcttcgacccagaaaataag aacgttgttactttcttcagacctttaaccctaatcgtcggtgccaacggagccggaaaa actacgattatagagtgtttaaaggtatcttgcactggagagttgccaccgaacgcgagg tctggtcatagcttcattcatgaccccaaggttgccggggaaacggagacaaaagcacaa attaagctgagattcaagacagctgcagggaaggatgtggtatgcataaggtcatttcag ttgacgcaaaaggcttcaaagatggagtacaaggctattgagagtgtgcttcaaaccatt aatcctcacactggagagaaagtatgtctcagctacagatgcgctgacatggatagggag ataccagctttgatgggtgtgtcaaaagctattttagaaaacgtcatatttgtgcatcag gatgagtctaactggccactgcaagatccttctactttgaaaaagaagtttgatgatatt ttttcagccaccagatatacaaaggctctggaagttattaagaaacttcacaaggatcaa gctcaggaaataaaaacttttaagttaaagttggaaaacctgcagaccttgaaagacgca gcttataagcttcgtgagagcattgcgcaagatcaagaaaggacagaatcttcaaaagtg cagatgttggaactggaaaccagcattcagaaagttgatgctgaagttcataataaggaa atgatgttaaaagatctgagaaagctacaagaccaagtatcaagaaaaactgcggaaagg agcaccttgtttaaggagcagcagagacagtatgcagaattacctgaggagaatgaagat actattgaagaactgaaagaatggaaaagcaagtttgaagaaagaattgctcttttggag accaaaattcgaaaaatggagagagagatggatgacacagcaactacaatttattcgctt cacaatgcaaaaactaactatatgctggagatcagcaagctacaaacagaagctgaagct catatgctgctgaagaatgaaagagattctaccattcagaaaattttttcccatcacaat ttaggaaatgttcctagtactcccttcggtactgaggtagttttgaatctcacaaatcga ataaaatcaagactgggtgaacttgagatggacttgctcgataagaagaaatcaaatgaa actgctctaagtacagcttgggattgctatatggatgctaatgatcgttggaaaagcatt gaagcccagaaacgagctaaagacgaaatcaagatgggcatatcaaaacgcatagaagag aaagaaattgagcgtgattcatttgaattcgaaatttccactgtggatgttaaacaaact gatgaaagagagaaacaagtgcaaattgagcttgagagaaagacaaaacagaattctgaa ttgggatttgaatccaaaatagaacagaaacagcatgaaatatacagcatggagcataaa attaagacactgaatcgagaaagagatgttatggctggtgatgctgaggatagagtgaaa ttgtctttaaagaagacggaacaggagaatcttaggaagaaacacaaaaagataatagat gagtgcaaggatcgaattagaggagtgctgaaggggagattgccacccgagaaggatatg aagaaggaaatagttcaagctctgaggtcaattgaaagggaatatgatgacctgagtttg aaatcccgagaagcagaaaaggaggtcaacatgttgcagatgaagatacaagaagtaaac aatagcctattcaagcacaacaaggatactgaatcaagaaagaaatacattgagtccaag cttcaggccttaaaacaggaatcagttaccattgatgcttatcccaaattgttggagtcg gctaaggacgaaagagatgaccgtaaaagcaagtataacatggcaaatggtatgcgcaag atgtttgaaccttttgaggatttagcacgtcaacatcattattgtccttgctgtgagcgc tcttttacaactgatgaagagaatagctttgttaagaagcaaagggtaaaggcttcaacc acgggggagcagcttaaaaaattagcagtggagtcttccaatgctgactctgtatttcag cagctagacaaactacgggcagtttttgaagaatactcgaaactaactagtgaaattatt cctctcgctgagaaaagtttgcaagagcatacagaagagctgggtcagaagtctcaagct cttgatgatgtattaggaatctctgcccagataaaagctgacaaagactcaattgaagca ctggtgcatcccctggaaaatgctgacaggacctttcaggaaatcgtatcctaccaaaag caaattgaagatcttgaatataagcttgatttcaggggtcttggggttaaaactatggaa gaaatccaatcagaattaagtagcctccaaagcagcaaggataaattgcacggtgagctg gagaaacttagagatgaccagatttacatggaacgtgatatttcatgcctccaggccaga tggcatgcagtaagggaggagaaggctaaggcagccaatttgttacgcgacgttacaaag gcagaagaagacctggagcgtttagccgaggagaaaagtcaacttgacctcgacgtgaag tatttggccgaggcactgggcccgttatccaaggaaaaagagcagttactgagtgactac aatgatatgaagattagacgtaatcaagagtatgaagaactggctgagaaaaagagaaac taccaacaggaagttgaggcattactcaaggccagttctaagataaatgagtatcatgat ctgaagaaaggggagcgcttaaatgatattcaagaaaagcagcggttatctgaatctcag cttcagagctgtgaagctagaaagaatgaacttgcaggtgaactgaacagaaataaagac ttgatgcggaatcaagatcaactgagaagaaatatagaggataacttgaactacaggaca acaaaagcaaaagttgaggagcttacacgtgagattgaatcattggaagagcaaatattg aatattggtgggattcccgcagttgaagctgaaattgtaaagatattgcgggaaagggaa agacttctttcagagctgaaccggtgtcgtggaacagtgtctgtttacgagagcagtatt tcaaagaacagagtggagctaaaagcggcacaatacaaggacatagataagcggcacttt gatcaactgatccagctaaagacaactgaaatggcaaataaagacttggatagatactac aatgcccttgacaaagcactaatgcgcttccacacaatgaaaatggaggaaataaataag attataagggaactgtggcagcagacatacagaggtcaagatatggattacatacgaata cactcagattccgaaggtgcaggcacccgctcttacagctacaaggttcttatgcagact ggtgatacagaacttgaaatgagaggaagatgcagcgcaggtcaaaaggttcttgcttca ttgataattaggctggctttagctgagacattttgcttaaactgtggaatattagccctc gatgagccaactacaaacctggatgggcccaattcagaatctcttgcaggagctcttctt aggatcatggaagacagaaagggccaagagaatttccaactcatagtcattacccacgat gaacgctttgctcaaatgattggccaacggcaacatgctgaaaaatattaccgggtcgca aaagatgatatgcaacacagcataatcgaggcccaagagatctttgattga

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