Arabidopsis lyrata (lyrate rockcress): 9315581
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Entry
9315581 CDS
T01578
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor RRN3
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aly03021
]
9315581
Transcription machinery [BR:
aly03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
9315581
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRN3
Motif
Other DBs
NCBI-GeneID:
9315581
NCBI-ProteinID:
XP_020885508
LinkDB
All DBs
Position
Unknown
AA seq
614 aa
AA seq
DB search
MGAVELLSDPSSLYTVDYVDNVDLSDTDLVQTVRNALTSVKTGDPDLYSELVGVINKDIK
EFRDPDAVAQLETVLKALSGSVACIDIVHHQKLLSSLFGMKLWDHRPVVMDALVNLVISL
AVTRGKYLDPCLNMLVSNFVPPPSVVNNLSHPRVLNKKIEVLSRVHAALLKISILVPLTP
SRLVPMLFQEMPKIHKKDHSIVIYVESLLKLENSPIGQVGGSMILGVVMERLRDLDLEIG
WDDIPQDDSSRGMFDMELEDAVEGTINEGDELPVGPLKQDTSDGSVVSKLLDKLMVVAFE
HLESCQNDGRLDQVFDILLESFENFILNTYKSKFTQFLMFYACSLDPENCGVKFASKLVE
IFLSSNKHPSTRMSAVAYLASFLARGKFLPVSFVASMLKRLIDECVGYCRTCNDDIRPEE
HQIFFSGCQAIMYVLCFRMRSILDVPRFRSQLTPLESILMHKLNPLRVCLPSVVAEFLRQ
AKAGGLFIVSDSFIFDDLLESELSRAFGGCERLDTFFPFDPCLLKTSNSFISRNFIYWSM
VSATYDEDEEDDDYDAEVIVNGDEDSDEGDEADLDYALNKMSITPKHSFKNKMERDRLLR
MPSRIRPSTSPESL
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgggagcagtagagcttctaagtgatccatcgagcttatacactgtagactatgtggac
aacgttgatttatctgacacagatttggtgcagaccgtgagaaacgcccttacatctgtc
aaaactggggacccagacctttacagtgagcttgttggagttattaacaaggacatcaaa
gaatttagggatcccgatgcagtggcgcagcttgagacagtcttgaaggctctgtcaggc
tctgtggcttgcatagatatcgttcaccatcaaaagcttctttcttcgctttttggaatg
aaattgtgggaccacagacctgttgtcatggatgcattggtgaacctagtcatatcactg
gctgtcactcgtggaaagtatctggacccttgtctgaatatgcttgtaagcaacttcgtt
ccgcctccttcggtagtaaataatctttcgcacccccgtgtactaaacaagaagatagaa
gttctttctcgggtgcatgcagcgcttctgaaaatatctattttggttcctcttactccc
tcaagattagtgccaatgctcttccaggaaatgcccaaaatacacaaaaaggaccattcg
atagtgatatatgtggagagcttattaaagttggagaatagcccaatcgggcaagttggt
ggcagcatgattcttggtgtggtgatggagaggctgcgagatttggatttagagattgga
tgggatgatattccacaagatgactctagtagaggcatgtttgatatggaacttgaagac
gcagttgaaggcactataaatgaaggagacgagcttcctgtgggacctctaaagcaggat
acatcagatggaagtgtagtctctaagttgttggacaaattaatggtcgtagcttttgag
catcttgaatcctgtcaaaatgatggtcgtttggatcaggtgtttgatatcctcttggag
tcatttgagaacttcattctgaacacatacaaatcaaaattcacccagtttctgatgttc
tatgcctgctcactggatcctgaaaattgtggtgtgaaatttgcaagtaagctggtggag
atttttctctccagcaacaagcatccatctaccagaatgagtgcggtggcttatcttgct
agcttcttggctcgtggaaagtttttgccggtttcctttgtggctagcatgttgaaaagg
ttgatagatgagtgtgtgggttactgcagaacttgcaatgatgatattaggcctgaagaa
catcagattttcttctccggatgtcaggcaatcatgtatgtgctctgcttccggatgagg
tccatcctggatgttcctcgctttcggtcccagcttacaccattggagtcaattttaatg
cacaagctaaacccattgagggtatgccttccatcggtagttgcggagttccttagacaa
gctaaagcaggtggtctgttcatcgtctcagactcgttcattttcgatgacctacttgag
tctgagctctcccgtgcttttggcgggtgtgagaggcttgatacgttcttcccatttgac
ccttgcttgctcaaaacctcaaacagctttatctcccggaatttcatctactggtcaatg
gtgagtgcgacctatgatgaagatgaagaagatgatgattatgatgctgaggtgatcgtg
aacggagatgaggacagtgacgaaggggacgaggctgatcttgactatgccctgaacaaa
atgtccataacgcctaagcactctttcaagaacaagatggaaagagacagactcttaaga
atgccttccagaatcagaccctccactagtcctgaatccttgtga
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