Arabidopsis lyrata (lyrate rockcress): 9315790 Help Entry 9315790           CDS       T01578                                  Name (RefSeq) protein VACUOLELESS1   KO K20180   vacuolar protein sorting-associated protein 16 Organism aly  Arabidopsis lyrata (lyrate rockcress) Pathway aly04148   Efferocytosis Brite KEGG Orthology (KO) [BR:aly00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     9315790  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:aly04131]     9315790 Membrane trafficking [BR:aly04131]  Endosome - Lysosome transport   Tethering complex    CORVET complex     9315790    Hops complex     9315790 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Vps16_N Vps16_C ANAPC4_WD40 WD40_WDHD1_1st Motif Other DBs NCBI-GeneID:  9315790 NCBI-ProteinID:  XP_002881559 UniProt:  D7LKS2 LinkDB All DBs Position Unknown AA seq 858 aa AA seqDB search MANVSVAAEWQLLYDRYYRKPEIYQMKWKHVDLSRNKVACASFGGPIAVIRDDSKIVQLY AESALRKLRIFNSAGILLSETVWKHPGGRLIGMSWSDDQTLICIVQDGTIYRYNIHAELI EPNMSMGKECFEQNVVECVFWGNGVVCLTEGGQLVCIFDFKTMKPSKLPDVPGLAEDDLL QPICLTVREPKYTMSGIAEVLVAVGDDIFVVEEDMVQTIRFDEPSVEDSEMQNDDSGNLI GVVQKMIVSPNGKFLTLFTHDGRIVVVDMETKQIAIDYCCESALPPQQMAWCGMDSVLLY WDEDLMMVGPVGDPVHYFYDEPVILIPECDGVRILSNTSLEFLQRVPDSTESIFKIGSTS PAALLYDALDHFDRRSAKADENLRLIRSSLSEAVESCIDAAGHEFDVTRQRALLRAASYG QAFCSNFQRERVQETCRTLRVLNAVRDPAIGIPLSIQQYKLLTPMVLISRLINAHCHLLA LRISEYLDMNKEVVIMHWACAKITASPSTPDSHLLEILLDKLQLCKGISYAAVATHADNC GRRKLAAMLVEHEPRSTKQVPLLLSIGEEDTALVKATESGDTDLVYLVIFHIWQKRPPLE FFAMIQGRVLARDLFVAYARCHKHEFLKDFFLSTGQIHEVAFLLWKESWDMGKNPMASKG SPLHGPRIKLIEKARNLFSQTKEHTFESKAAEEHAKLLKIQHELEASTKQAIFVDSSIND TIRTCIVLGNNRAAIKVKTEFKVSDKRWYWLKAFALATIKDWAALEKFSKEKRPPMGFRP FVEACIDADEKAEALKYIPKLSDLVERGEAYARIGMAKEAADAAAQANDGGELLERFRKT FVQNAIFDTLKMPFQGAS NT seq 2577 nt NT seq  +upstreamnt  +downstreamnt atggcaaacgtgtctgttgctgcggaatggcaacttctctatgatcgatattataggaag cctgagatataccaaatgaaatggaaacatgtagatttgagtcgtaacaaggtggcgtgt gcttcatttggtgggccaattgcagttattcgagatgactcgaagattgtccaactatat gctgaatctgctctaagaaagctccgcatctttaattcagcaggtatacttctctctgag acggtctggaagcatcccgggggacgtctgatcggaatgtcctggtcagatgatcagaca ctaatttgcattgtccaagatggcactatttatcgttataacatccacgctgagctcatt gagcccaatatgtcaatgggcaaggagtgctttgagcagaatgtggtggagtgtgtcttc tggggaaatggtgttgtctgcttgacagaaggagggcagttggtctgtatcttcgatttc aagacaatgaagccttctaagttgcctgatgtaccggggttagcagaagatgatctgctt cagccaatttgcttgactgtgagggaacctaagtacacaatgtctgggattgctgaggtg ttagtagcagttggcgatgatatttttgttgtggaggaggacatggttcaaactattagg tttgatgagcctagtgttgaagactctgagatgcagaatgatgattctgggaatttgatt ggagtggtccagaagatgattgtatcacctaatggaaaatttctaacactcttcactcat gatggccggattgttgttgttgacatggaaacaaaacaaattgctattgactactgttgt gagtcagcccttcctccgcagcaaatggcttggtgtggaatggatagcgttctgctctat tgggatgaagatttaatgatggtgggtcctgtaggagacccagttcactatttctatgat gaacctgtaattcttatcccagaatgcgatggagtgagaatattatctaacacgagcctt gaatttctgcaaagagtacctgattctaccgagtcaatctttaagattggaagcacctca cctgcagctttgctatatgatgctttggatcattttgacaggcgaagtgctaaggcagat gaaaatttgagattaattcgttcatcactgtctgaggctgttgaatcctgtattgatgcc gctggccatgaatttgatgtaactcgtcagagggctcttttacgagcggcaagctatgga caagctttctgcagcaattttcagcgtgaacgtgtccaagagacttgtagaacgttacgg gttctaaatgcggttcgtgatcctgctattggcatacctcttagcattcagcagtacaag ttactgacaccaatggttttgattagtcgccttattaacgctcattgccaccttcttgct ctgcggatatctgagtacttagatatgaataaagaagtggtgataatgcattgggcatgt gcaaagataactgcttcaccatcaactccagattctcatcttcttgaaattttacttgat aagctccaactatgcaaaggaatatcttatgctgcagtggccactcatgctgataactgt ggccgtcgaaagttagctgcaatgctagttgaacacgaaccacgctccacgaaacaggta cctcttttattaagcattggggaggaagacactgctttagtgaaagcaactgagagcggt gacaccgacctggtttatctggtcatatttcatatatggcaaaagaggcctcctttggaa ttctttgcgatgatccaaggaagagttttggcacgtgatctatttgtagcttatgcacgg tgtcataaacatgaatttctgaaggattttttcttatctacgggccagattcatgaggta gcttttcttttatggaaagaatcatgggatatgggtaaaaacccaatggctagcaaagga tccccgctgcacggtccgcgtataaaactaatagagaaggccagaaaccttttctcccag acaaaggaacacactttcgagtctaaggctgctgaggagcatgcaaaactcctgaagata caacatgagctagaagctagtacaaagcaggctatctttgttgattcaagcatcaatgat actatacgcacatgtattgtactgggtaataatcgtgctgcaataaaagtgaagacagaa ttcaaggtcagtgataaaagatggtattggcttaaagcatttgctctggctacaatcaaa gactgggcagcgcttgaaaagttttcaaaggaaaagagaccaccaatggggttccgtcca tttgtggaggcatgcattgacgcagatgagaaagcggaagctctaaaatacatccctaaa ctatcagatcttgtcgaaagaggcgaggcttatgctcgtattggaatggcaaaggaagcg gctgatgcagcagctcaggcaaatgatggaggagaattgcttgagagattcaggaagacg tttgtacagaatgctattttcgataccttgaaaatgcctttccaaggagcctcctag

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