Arabidopsis lyrata (lyrate rockcress): 9315820
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Entry
9315820 CDS
T01578
Name
(RefSeq) transcription elongation factor TFIIS
KO
K03145
transcription elongation factor S-II
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aly03021
]
9315820
Transcription machinery [BR:
aly03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
9315820
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
Motif
Other DBs
NCBI-GeneID:
9315820
NCBI-ProteinID:
XP_020882924
LinkDB
All DBs
Position
Unknown
AA seq
383 aa
AA seq
DB search
MESDLIGLFEGAKKAADAAALDGVASSGPEVSQCLDALKQLKKFPVTYDTLVATQVGKKL
RSLAKHPIEEIKSVATDLLEIWKKVVIGETAKAKKTEGTNGCKAETVKEAKVNKMDVDKP
SNPAPVKVQKLQRGDSAKSIKVERKEPDNKGVTGVKIERKELDNKVTNGTKIDYRGQAVK
DEKVSKDNQSSMKAPAKAPNAPPKLTAMLKCNDPVRDKIRELLVDALCRVAGEADDYERK
SVNASDPLRVAVSVESLMFEKLGRSTGAQKLKYRSIMFNLRDGNNPDLRRRVLTGEISPE
KLITLSAEEMASDKRKQENNQIKEKALFDCERGLAAKASTDQFKCGRCGQRKCTYYQMQT
RSADEPMTTYVTCVNCDNHWKFC
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtgatttgattggattgttcgagggagctaagaaggcagccgatgcggcggct
ctcgacggtgttgcttcctcaggtcctgaggtttctcaatgtctcgatgcccttaaacag
ctcaagaagtttcctgtcacatacgatacgctcgttgcgactcaggtgggaaaaaagctg
aggtctcttgcaaaacaccctattgaggagatcaaaagcgtagctactgatttgcttgag
atatggaagaaagttgtcattggagagacagccaaggctaagaaaaccgaaggcactaac
ggttgtaaagctgaaactgtcaaagaggctaaggtgaataagatggatgttgataagcct
tcaaatcctgctcctgttaaagtccagaaacttcagaggggtgattcggctaagagtatc
aaggttgagagaaaggaaccagacaataaaggcgttactggtgtcaagatagagagaaag
gaactagacaacaaagtcactaatggaaccaagatagattatcgtggtcaggctgttaag
gatgaaaaggtctcaaaggacaaccaatcaagtatgaaagctccagctaaggcacctaat
gctcctccaaaactaactgcaatgctcaaatgcaatgatcctgtgcgtgacaaaatccgt
gagttgcttgtagatgcgttgtgcagggttgctggagaagctgatgactatgagagaaag
tcagtaaatgctagtgatccactccgtgttgctgtctcagtggaatcactgatgtttgag
aaattgggtcgctcaactggagctcagaagcttaagtacagatctataatgttcaacctg
agggacggtaacaacccggacttaagaaggagggttctcaccggggagatttcaccagag
aaactcatcacattgtctgctgaagaaatggcaagcgacaagaggaaacaagagaacaat
cagatcaaagagaaagccctgtttgattgcgagcgtggtcttgcagcaaaagcatctacc
gaccagttcaagtgcgggcggtgtggtcaacgcaaatgcacctactatcagatgcaaaca
agaagtgctgatgagccaatgacgacctatgttacatgtgttaactgtgacaaccactgg
aagttctgttaa
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