KEGG   Arabidopsis lyrata (lyrate rockcress): 9315835
Entry
9315835           CDS       T01578                                 
Name
(RefSeq) protein ELC-like
  KO
K12183  ESCRT-I complex subunit TSG101
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03250  Viral life cycle - HIV-1
aly03272  Virion - Hepatitis viruses
aly04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    9315835
   03272 Virion - Hepatitis viruses
    9315835
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    9315835
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:aly04131]
    9315835
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:aly04147]
    9315835
Membrane trafficking [BR:aly04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    9315835
Exosome [BR:aly04147]
 Exosomal proteins
  Proteins found in most exosomes
   9315835
SSDB
Motif
Pfam: UEV Vps23_core RWD Fibroin_P25 UQ_con
Other DBs
NCBI-GeneID: 9315835
NCBI-ProteinID: XP_002879768
UniProt: D7LCC3
LinkDB
Position
Unknown
AA seq 333 aa
MAASSSSSQVRFIEKALLATGSFALSYTDPDQKWLIRKHLTSLLQDYPNFELSTDIFNHN
NGAKVQLFCLEGSLGIRNSTTQLPAVQLTIWIHENYPLTPPLVFINPNSIPIRTNHPFVN
SSGFTNSRYIETWEHPRCNLLDFIRNLKKVLANDHPFLHTESIPTRNQSVSRTEALDRLA
TSLHYDVLTIMERSEEEIENLWKLQSEVKQRSESVKTIINELEMERETLKVRALNLKDDS
DVLATWVETNYDTLMKATSMDMGIEEMFEIEPEVEGLAGDDAIEDVLRVLEEAAERGELE
IALYLKQVRVLAREQFFIRHYRLKLEFPYLSML
NT seq 1002 nt   +upstreamnt  +downstreamnt
atggcagcatcatcatcttcttctcaagtcagattcatagaaaaagcccttctcgccacc
ggttcatttgctctatcctacacagatcctgatcaaaaatggctcatcagaaagcaccta
acttcactactccaagattatccaaacttcgagctctcaaccgatattttcaatcacaac
aacggcgccaaagttcaactcttttgccttgaaggatctctaggtattcgaaactccact
acacaactcccagccgtgcaattaaccatttggattcacgaaaactacccattaacgcct
cctctggtgtttataaaccctaattcaatcccaattcgcaccaaccacccattcgtcaat
tcttcaggattcacaaactctagatacatcgaaacatgggaacacccacgatgcaattta
ctcgatttcattcgaaacctcaagaaagttctcgctaatgatcacccatttctacacact
gaatcaatcccaactcggaatcaatcagtttcgagaaccgaagccttagatcgattagct
acgagtctccactacgacgttctaacaatcatggagagatcagaggaagagattgaaaac
ctatggaaacttcaatcagaggtgaagcaaagatctgaatcggttaaaacaatcatcaat
gagcttgagatggagagagagacattaaaggtgagagctttaaatctcaaagatgattcc
gatgttttggccacatgggtggagacgaactatgatacgttgatgaaagcgacgtcgatg
gatatgggaatcgaggaaatgtttgaaattgaaccggaagtggagggattggcgggagat
gacgccattgaagatgtgttgagagtactggaagaagctgcggagagaggagagttggag
atagctttgtatctaaagcaagtgagagtgttggccagagaacaattcttcattaggcat
tatcgtttaaaactcgaatttccatatttgagtatgttgtga

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