Arabidopsis lyrata (lyrate rockcress): 9316216
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Entry
9316216 CDS
T01578
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1-like 1 isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9316216
Enzymes [BR:
aly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
9316216
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
9316216
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-C3HC4
zf-RING_5
zf-C3HC4_2
zf-RING_2
zf-RING_6
zf-rbx1
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_5
Prok-RING_4
DUF1380
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
9316216
NCBI-ProteinID:
XP_020882677
LinkDB
All DBs
Position
Unknown
AA seq
879 aa
AA seq
DB search
MASTGEPDRKRRHFSSISPSEAAAAVKKQPFFWPSSEDKLDTAVLQFQNLQLSQKLEAQQ
VECSILEDKLSQIKEKQLPYSSSLKTVHKSWEKQLTATVESCSVRVSDSSSGAHRFVNKE
DGSSPAVKNDFINRLLETGATESSSSNICSNRMEENGVNTSSQMTQTLSNLVAATDDLRC
LKDDLYPTVLRTSLGKDLCGQLALSELESEIKSFRGDLDDVLVKFKSLSRELQSHRDADA
KVRADLKRIRGELEDEVVELQQCNGDLSALRAERDATAGAFFPVLSLGNKLATSDRERDK
QRDLHDMETVLKELTVLASGRLQELKDLHEERTKMLEKMSNLQNKSKSVRCISSSQACLS
LKDQLKKSKEAVFQYMALLEKLQVEKDSIVWKEREMNIKNELVDVSRRTSAVADSRMASL
DSVIQKQLDEKMRIKTRLGNISRERGRKEIFADMKALISSFPEEMSSMRNQLDNYKETAG
GIHSLRADVQSLSGVLCRKTKECEALHLTSADYASQLGDLNATVCDLKNSHEELKLFLDM
YKRESTDPRDIAEAKEQEYRAWAHVQSLKSSLDEQNLELRVKAANEAEAVSQQMLAAAEA
EIADLRQKMDDCKRDVAKHSDILKSKHEEHGTYLSEIQTIGSAYEDIVPQNQQLLLQVTE
RDDYNIKLFLEGITSRQMQDTLLIDKYIMDKDIQQGSAYASFLSKKSSRIEDQLRFCTDQ
FQKLAEDKYQKSVSLENLQKKRADIGNGLEQARSRMEESHSKVEQSRVDYGALELELEIE
RFNRRRIEEEMEIAKKKVSRLRSLIEGSSAIQKLRQELSEFKEILKCKACNDRPKEVVIT
KCYHLFCNPCVQKLTGTRQKKCPTCSASFGPNDIKPIYI
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcacaggcgagcctgaccgtaaaaggcgtcactttagctctatatcaccctct
gaagctgcagccgccgtaaagaaacaacctttcttttggccctcctccgaggacaagctt
gatactgcagttcttcagttccaaaatctgcagctatcacaaaagctagaggctcagcag
gttgagtgttctattcttgaggataaactttctcagatcaaggaaaaacaattaccatac
agctccagtttgaagactgtccataagtcttgggaaaagcagcttacagctacagtggaa
tcatgctctgttcgtgtgagtgattcaagcagcggagctcataggtttgtaaacaaggag
gatgggtcgtctccagccgtgaaaaacgatttcatcaaccggctactcgaaactggtgcc
actgagagctcctcatccaatatctgctcgaatcggatggaagaaaatggagtgaatacg
tcaagccagatgacgcaaaccttgtctaacctagtagccgcgacagatgatttgaggtgt
ctgaaagatgacctttatcccacagttctcagaaccagtcttggtaaagatttgtgcggt
cagctagctctgagtgagttggaatcagaaattaaaagtttcagaggggatctagatgat
gtacttgtgaagttcaaatcactttctagagaattgcagagtcatcgcgatgctgatgct
aaagttagagcagacctcaaacgaataagaggggagctagaggatgaggtcgtggagctt
cagcagtgtaatggtgacttgtcagcattgagagcagaaagagatgcaacagcaggggcg
tttttcccagtgttgagccttggaaataagcttgctaccagtgatagggaaagggataaa
caaagggatctgcatgacatggaaacagttctgaaagagttaacggtcctggcttcaggc
aggctacaagagctaaaagatcttcatgaggagaggacaaagatgcttgaaaaaatgagt
aatttacagaacaagtcaaagtctgtgaggtgcatctcatcttctcaagcctgcctttct
ttgaaagaccagctaaaaaaatccaaagaagcagttttccagtatatggctttacttgag
aaactgcaggttgaaaaagatagtatagtctggaaggaaagggagatgaatataaaaaat
gaactagttgatgtttctcgaaggacttctgctgttgctgattccagaatggcatcttta
gattcggtgatacagaaacaactggatgaaaaaatgcgaatcaagactaggctgggaaat
atatcaagagagcgaggtagaaaagaaatctttgcagatatgaaggcattaatttcttcg
ttccctgaggaaatgagttccatgcgtaatcaattggacaattataaagagactgctgga
ggtattcattctctacgggctgatgtccagtccctctctggggttctatgtaggaagaca
aaagagtgtgaagcattgcatttgacatcagctgattatgcttctcagttaggtgacctg
aatgctacggtttgtgatttgaagaacagtcatgaggaattaaagttgtttctggacatg
tataagcgtgagtccactgatccgagggacatagctgaagccaaggaacaggagtacagg
gcttgggctcatgttcagagtttgaaatcatcccttgatgagcaaaatctggagttgcgc
gttaaggcagcaaatgaagcagaagccgtttcccaacaaatgttggctgctgcggaagca
gagattgctgatttaaggcagaaaatggatgattgtaaacgggatgtcgccaagcattct
gatattttgaaatctaaacatgaagaacatggaacatatctttctgaaatacagacaatt
ggaagtgcctatgaggacattgtaccgcaaaaccaacagcttttgcttcaagtgacagag
agggatgactataacatcaagcttttcttggaaggcataacttcaaggcagatgcaagat
accctgcttatcgataaatacatcatggataaggatatacagcaaggcagtgcatatgcc
agtttcctatccaagaaatcatcaagaattgaagatcagttgaggttctgcacagatcag
tttcagaaactagccgaagataaatatcaaaagtctgtttctcttgaaaatctgcaaaag
aaacgtgcagacattgggaatggcttggaacaagctaggtcgaggatggaggagtcccat
tctaaagttgagcaaagtcgggtggattatggggcattagaactggaactggagattgaa
aggttcaacaggagaaggatagaggaggaaatggaaatagccaaaaagaaagtttctcgt
cttcggtctctcatagaaggatcatcggccattcaaaagctcagacaagaactcagtgaa
ttcaaagaaattctgaagtgtaaggcctgcaacgatcgcccaaaagaggtggtgattacg
aagtgctaccatttgttctgtaacccatgtgtgcaaaagctcacaggaactcggcaaaaa
aagtgtccaacatgctcagcaagttttgggcctaatgatattaaacctatctacatatga
DBGET
integrated database retrieval system
