Arabidopsis lyrata (lyrate rockcress): 9316307
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Entry
9316307 CDS
T01578
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 3
KO
K05391
cyclic nucleotide gated channel, plant
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
9316307
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aly04040
]
9316307
Ion channels [BR:
aly04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
9316307
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
9316307
NCBI-ProteinID:
XP_002880240
UniProt:
D7LEI4
LinkDB
All DBs
Position
Unknown
AA seq
704 aa
AA seq
DB search
MMNPQRNKFVRFNGNDEFSTKTTRPSVTSVMKTVRRGFEKGSAKIRTFKQPLSFHSKKNQ
ENKKKKILRVMNPNDSYLQNWNKIFLLLSVVALAFDPLFFYIPVVNPVRFCLNLDTKLEA
IACIFRTFIDAFYVVHMLFQFHTGFIAPSSRGFGRGELNENPKEIAIRYLSSYFLVDLLS
ILPIPQVVVLAIVPRMRVPASLVAKELLKWVIFCQYVPRIARIYPLFKEVTRTSGLVTET
AWAGAALNLFLYMLASHVFGSFWYLISIERKDRCWREACAKIVGCSHEKLYCSPTGEDNR
QFLNGSCPLIDPEEISNSTVFNFGIFADALQSGVVESRDFPKKFFYCFWWGLRNLSALGQ
NLKTSTFEGEIIFAIVICVSGLVLFALLIGNMQKYLQSTTVRVEEMRVKRRDAEQWMSHR
MLPDDLRKRIRKYEQYKWQETKGVEEEALLSSLPKDLRKDIKRHLCLNLLKKVPWFQAMD
DRLLDALCARLKTVLYTENSYIVREGEPVEDMLFIMRGNLISTTTYGGKTGFFNSVRLVA
GDFCGDLLTWALDPLSSNFPISSRTVQALTEVEGFVLSADDLKFVATQYRRLHSKQLRHM
FRFYSVQWQTWAACFIQAAWKRHCRRKLSKALREEESKLHNTLQNDDSGGNKLNLGAAIY
ASRFASHALRNLRANAAARNSRFPHMLSLLPQKPADPEFSMDGT
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatccccaaagaaacaaattcgtaaggtttaatggaaatgatgagttttcgacc
aaaactactagaccatcagtaacttcagttatgaaaaccgttagacgaggcttcgaaaag
gggtcagcgaaaatcagaacctttaagcagcccttgagctttcattcaaagaagaatcaa
gaaaacaagaagaagaagatactaagagtgatgaatcctaacgattcttatcttcaaaac
tggaacaagattttcttgcttctctctgttgtggctttagcctttgatcctctgtttttc
tatatccccgttgtgaaccccgtgagattctgtcttaatctagatacgaaactcgaggca
atcgcttgcattttccgcactttcatcgacgctttctatgtggttcacatgctgtttcag
tttcataccggtttcatcgctccttcgtctcgtggtttcggaagaggagagcttaatgag
aatcctaaagaaatcgctataagatacctcagctcatactttctggttgatcttctttcg
attctccctattccgcaggtagttgttctagctattgttccaaggatgagagtacccgcg
tcgctggtagcaaaagagctattgaaatgggtaatattttgccaatatgttccgaggata
gctcggatctatcccctttttaaagaagtaacaaggacttctggtttggtaactgaaact
gcttgggctggagctgctttaaacctattcctctacatgttagctagccacgtttttggg
tctttttggtacttgatttcgatagaaaggaaagatagatgttggcgcgaagcgtgtgct
aagatagttggatgcagtcatgaaaaactgtactgttcaccaacaggggaagacaatagg
cagtttttaaacggttcttgtcctttgatcgatcccgaagaaatctcaaactcgacggtt
ttcaactttggtatattcgctgatgcattgcagtctggagttgtggagtctagagatttc
cctaagaagtttttctactgtttctggtggggtctccgcaatcttagtgctttgggccaa
aacttgaagacgagtacctttgaaggagagatcatttttgcgattgtcatttgtgtctct
ggactagtcttgtttgctcttctcattggaaatatgcagaaatatttgcaatcaactact
gtaagagttgaggaaatgagagtgaaaaggagagatgcagagcaatggatgtctcatcgg
atgttgccagacgatctgagaaaacgtatccgtaaatacgaacagtataaatggcaagaa
accaaaggagttgaggaagaagctcttctctctagtcttccaaaagatctcagaaaggac
attaaacgccatctttgtctcaatttgctcaaaaaggtgccttggtttcaagctatggat
gatcggttactagacgctctatgtgctcgtctcaaaacggttctttacacagagaacagt
tacattgtgcgcgaaggtgaaccagtggaagatatgttgtttataatgagaggaaatcta
ataagcacaaccacttatggtggcaaaactggtttcttcaattcggttcgcttagttgct
ggtgatttttgtggagatcttctcacttgggcattagatcctctcagttcaaacttccct
atctctagtagaaccgttcaagctttgacagaagtcgaaggctttgttctctcagctgat
gatctcaagtttgttgctactcagtatcgccgcctccatagcaagcaactccgacacatg
ttcaggttttattcggtgcaatggcagacatgggcagcatgttttatacaagcagcatgg
aagagacattgtagaaggaagctctcaaaggctttacgtgaagaagaaagcaaactacat
aacactcttcagaacgatgattcaggaggcaataagcttaacttaggtgctgcgatttat
gcgtcgaggtttgcttctcatgctctgaggaatctaagggcgaatgcagcagcacgcaac
tctagatttcctcatatgttatctttgttgcctcagaaaccagccgatccggagttttct
atggatggaacctaa
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