Arabidopsis lyrata (lyrate rockcress): 9316344
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Entry
9316344 CDS
T01578
Name
(RefSeq) ABC transporter B family member 4
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
9316344
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aly02000
]
9316344
04147 Exosome [BR:
aly04147
]
9316344
04090 CD molecules [BR:
aly04090
]
9316344
Enzymes [BR:
aly01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
9316344
Transporters [BR:
aly02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
9316344
Exosome [BR:
aly04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
9316344
CD molecules [BR:
aly04090
]
Proteins
9316344
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_29
AAA_16
ABC_ATPase
RsgA_GTPase
Zeta_toxin
AAA_21
AAA_5
DUF815
DUF87
AAA_30
nSTAND1
G-alpha
DEAD
SbcC_Walker_B
AAA_15
DLIC
Motif
Other DBs
NCBI-GeneID:
9316344
NCBI-ProteinID:
XP_020885129
LinkDB
All DBs
Position
Unknown
AA seq
1286 aa
AA seq
DB search
MASESGLNGDSNIVEEVSETKRGKEKEEVKKTEKKDEEHEKTKTVPFYKLFAFADSFDFL
LMTLGTLGSIGNGLGFPLMTLLFGDLIDAFGQNQTNTDVTAKVSKVALKFVWLGIGTFAA
AFLQLSGWMISGERQAARIRSLYLKTILRQDIAFFDIDTNTGEVVGRMSSDTVLIQDAMG
EKVGKAIQLLATFVGGFVIAFVRGWLLTLVMLTSIPLLVMAGALLAIVIAKTASRGQTAY
AKAATVVEQTIGSIRTVASFTGEKQAISNYNKHLVTAYKAGVIEGGSTGLGLGTLFLVVF
CSYALAVWYGGKLILDKGYTGGQVLNIIIAVLTGSMSLGQTSPCLSAFAAGQAAAFKMFE
TIERKPNIDSYSTDGKVLDDIKGDIELKDVYFTYPARPDEQIFRGFSLFISSGTTVALVG
QSGSGKSTVVSLIERFYDPQTGEVLIDGINLKEFQLKWIRSKIGLVSQEPVLFTASIKDN
IAYGKEDATIEEIKAAAELANASKFVDKLPQGLDTMVGEHGTQLSGGQKQRIAVARAILK
DPRILLLDEATSALDAESERVVQEALDRIMVNRTTVVVAHRLSTVRNADMIAVIHQGKIV
EKGSHTELLKDPEGAYSQLIRLQEEKKSDETATEEQKMSSIESFKQSSLRKSSLGRSLSK
GGSSRGNSSRHSFNMFGFPAGIDGNVAQDQEDDTTQPKTEPKKVSIFRIAALNKPEIPVL
ILGSISAAANGVILPIFGILISSVIKAFFQPPKKLKEDTSFWAIIFMVLGFASIIAYPAQ
TFFFAIAGCKLVQRIRSMCFEKVVHMEVGWFDEPENSSGTIGARLSADAATIRGLVGDSL
AQTVQNLSSILAGLIIAFLACWQLAFVVLAMLPLIALNGFLYMKFMKGFSADAKKMYGEA
SQVANDAVGSIRTVASFCAEDKVMNMYTKKCEGPMKTGIRQGIVSGIGFGFSFFVLFSSY
AASFYVGARLVDDGKTTFDSVFRVFFALTMAAMAISQSSSLSPDSSKADVAAASIFAIMD
RESKIDPSVESGRVLDNVKGDIELRHVSFKYPARPDVQIFQDLCLSIRAGKTVALVGESG
SGKSTVIALLQRFYDPDSGEITLDGVEIKSLRLKWLRQQTGLVSQEPILFNETIRANIAY
GKGGDASESEIVSSAELSNAHGFISGLQQGYDTMVGERGIQLSGGQKQRVAIARAIVKDP
KVLLLDEATSALDAESERVVQDALDRVMVNRTTIVVAHRLSTIKNADVIAVVKNGVIVEK
GKHDTLINIKDGVYASLVQLHLTAAS
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagagagcggcttaaatggagattcaaatatagtagaagaggtttctgagacc
aaaagaggcaaagaaaaagaagaagtgaagaaaacagagaagaaggacgaggaacatgag
aaaaccaaaacggtgccgttttacaagctctttgcttttgcagattcctttgatttcctc
ttaatgaccctcgggacgcttggatctattggaaacggtctcggcttccctctcatgacc
ttactgttcggagatctcatagatgcttttggacagaatcagactaatacagatgttacc
gccaaagtctccaaagttgctctgaagtttgtttggcttggaatcggtactttcgcagct
gcttttctccaattgtctggttggatgatatctggagagagacaagcagcgagaataagg
agtttgtatctaaagacaatcttaagacaagatattgcctttttcgacatcgatacaaat
accggagaagttgttggaagaatgtccagtgacactgtgctaatccaagacgccatggga
gagaaggtgggaaaagctatacaacttcttgcaacatttgtaggaggctttgtgatagct
ttcgtaagaggatggcttctaactttggttatgttaacttcaattcctcttcttgtaatg
gcgggtgcacttctggctattgtcattgctaaaacagcttctcgtggacaaactgcctac
gcgaaagctgcgactgtagttgagcaaacaattggttctataagaacggttgcgtcgttt
acaggagagaaacaagcgataagcaattacaataaacatcttgtcactgcttataaagca
ggagtcattgaaggtggttcaactggattgggtcttggaacgctctttcttgtagtcttt
tgtagctacgctttagcggtatggtatggaggaaagttgatattggataaagggtacaca
ggaggacaagttctcaatatcatcatcgctgttttaactggatccatgtcgttaggtcaa
acatcgccttgcttaagcgcatttgcagctggacaagccgcagctttcaaaatgtttgag
acaattgagagaaaacctaacatagattcttatagtacagatggtaaagttttggatgac
attaagggagatattgagcttaaagatgtttacttcacttaccctgcaagacccgacgag
caaatattccgcggattttcactgtttatctcgagtggtacaacagtggctttggttgga
cagagcgggagcgggaaatcaactgttgtgagtctgattgagaggttttacgatccgcaa
actggtgaagttctcatagatggtatcaacttaaaagaatttcagctaaaatggattaga
agcaagattggacttgtgagtcaagaaccagttttgttcactgcaagcatcaaagacaac
attgcgtacggcaaagaagacgcaactatcgaagagattaaggccgctgcggagctagca
aatgcatctaaatttgtggataagcttccacagggtctggatacaatggttggagaacac
ggtactcaactttcaggtgggcaaaaacagagaatcgctgtggctagagctattttaaaa
gatccaagaatcttgcttttagatgaagctacaagcgcacttgatgcagaatccgagaga
gtggttcaagaagcgcttgatagaatcatggttaaccggactacagttgtggtcgcccat
cggttaagcactgtgcgaaatgcggatatgatcgctgtgattcaccaaggcaagattgtc
gaaaaaggttctcacactgaactactaaaggacccggaaggagcttattctcagctgatt
cgtctacaagaagagaagaaatctgatgagactgcaacggaggagcaaaagatgtcatca
attgaatcattcaaacaatctagtctgagaaaatcgtctctaggccggtctctaagcaaa
ggaggatcatccagaggaaacagcagccgccattctttcaatatgtttggttttccagca
ggaattgacggaaacgtcgctcaagatcaagaagatgatactactcaaccaaaaaccgaa
ccaaaaaaagtctccattttcagaatcgctgctctaaacaaaccagagattccggtacta
atactcggatcaatatctgcagcagcaaatggcgttattcttccaatttttggcatacta
atctccagcgtaatcaaagcgtttttccaaccacctaaaaagctaaaagaggatacaagc
ttttgggcaatcatattcatggttcttggtttcgcatccatcatcgcatacccagcacaa
accttcttcttcgccatagctggatgtaaactggtgcagaggatcagaagtatgtgtttt
gagaaagtggttcacatggaagttggatggttcgacgagccagagaattcgagtggaacc
ataggagcaaggctatcagcagatgcagcaacaatccgtggtctagttggagactctttg
gctcagacagttcagaatctttcgtctatattggctggtttgatcattgcgtttttggct
tgttggcaattagctttcgtcgtcctcgcgatgctcccgcttattgcactcaatggattt
ctatatatgaagttcatgaaaggtttcagcgcagatgcaaagaaaatgtatggggaagca
agccaagtagcgaatgacgcggttgggagcataagaaccgttgcttcattctgtgcagaa
gacaaagtgatgaacatgtacaccaagaaatgtgaaggtccgatgaagacagggattcgt
caaggcatagtcagtggtattggtttcggattctctttcttcgtcctcttctcttcttat
gctgccagtttctacgttggagcacgccttgtcgatgatggcaaaacaaccttcgactct
gttttcagggttttctttgctttgacaatggcggctatggcgatatctcaatcgagttcg
ttatctcctgattccagcaaagccgatgtagctgctgcttcgattttcgcaattatggac
agggaatcgaagattgacccaagtgtggaatctggaagagtgttggacaatgttaaagga
gacattgagcttcgtcatgttagtttcaaatacccagcaagaccagatgttcaaatcttc
caagatctctgtctaagcatccgagcgggaaagacagttgctttggtcggagaaagcggg
agcgggaaatcaacggtgatcgcattgttgcagaggttttacgatccggactccggtgag
atcactcttgacggtgtagagatcaagagcctgagactaaaatggctgagacaacaaacg
ggacttgtgagccaagaaccaatcttgttcaacgagacaattagagccaacattgcttat
ggcaaaggaggagacgcgagtgaatccgaaatcgtatcttcagctgaattatctaacgcc
catggattcatcagtggtctacaacagggttatgatacgatggtgggagaaagaggaatt
cagttatcaggtggacaaaagcaacgagtagccatagccagagccatcgtcaaggatcca
aaggtgttgctactcgacgaagcgacgagtgctcttgacgctgagtctgaacgcgtggta
caagacgcgcttgatcgggttatggtaaaccggactacaattgtggtagctcaccggtta
tcgacgattaaaaatgctgacgtaattgccgtcgttaagaacggcgtcatcgttgagaaa
ggaaagcacgacactttgataaatatcaaagacggagtttatgcttcgttagttcagctt
catctcaccgcagcttcttaa
DBGET
integrated database retrieval system
