KEGG   Arabidopsis lyrata (lyrate rockcress): 9316350
Entry
9316350           CDS       T01578                                 
Name
(RefSeq) E3 ubiquitin-protein ligase hel2
  KO
K22381  E3 ubiquitin-protein ligase ZNF598 [EC:2.3.2.27]
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:aly00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:aly04121]
    9316350
Enzymes [BR:aly01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     9316350
Ubiquitin system [BR:aly04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    9316350
SSDB
Motif
Pfam: PAH_ZNF598 zf-C2H2_13 zf-C3HC4_3
Other DBs
NCBI-GeneID: 9316350
NCBI-ProteinID: XP_020883416
LinkDB
Position
Unknown
AA seq 742 aa
MDDSCAVCAENLEWVGYGSCGHREVCSTCVVRLRFILDDRRCCICKTECPVVFVTKALGD
YTKTISDFSTTFPSVLKEGRVGSFWYHEETNVFFDDLNHYTRIKAMCRLSCNSCKETNKS
HPKKGPNHCLRFKSVEHLKDHLSHQHKLHMCSLCLVGRKVFICEQKLFTKAQLNQHISSG
DSEVDGSESERGGFTGHPMCEFCKRPFYGDNELYTHMSREHYTCHICQRLKPGQYEYYGN
YDDLEVHFRSDHFLCEDETCLAKKFIVFQIEAELKRHNSIDHGGRMSRSQQSASLQIQAS
FQYQSSRRGRRRSSLREPNLAVLESQASYAINDGNNLLQHVGRYGGSRLGESSFPPLSVP
ANQGQSRFGHNSESLLSNTTTTRLRHQTNRSATSGSSRAWPALNRGPTETSITSSVQSSG
ASAQSQSGHHGRVEITRTLASAVPQDARNEHTTVGGCSSGSSLSSANTSKRNNHHSSSTP
KMSDTRSLEQPSHSDSPPISAVKNRRSSSTSASAANIQVAQGVSDVQSDNKSLVEKIHAS
LGHDEELFMAFKNTSGKYRHGSIDARTYLEYVKGYGLSHLVLDMARLCPDPQRQKELIDT
HNACLKGGNKGKAVKVESSSDSKGDRFVDTVRKLQFSDKSQDKDKDKDAYRSDKGKTKVT
TLVNSSSAGVGLGDTGKQPKKTSKFLRTRLGEKSMAAVLDLKNSNPEPEAEPKNDNSKRS
QNSLGGLPLRGAWRRGSAKLFL
NT seq 2229 nt   +upstreamnt  +downstreamnt
atggatgatagttgcgccgtttgcgcggagaatctcgaatgggttggttacggatcttgt
ggtcacagagaggtttgctctacttgtgtcgttcgtcttcgtttcatactcgatgatcgt
cgatgttgtatctgcaaaaccgaatgccccgtcgtcttcgtcacaaaggctttgggtgat
tatacaaagacgattagtgatttctccactacttttccatcagtattaaaggaaggtcga
gtaggatctttctggtatcatgaagaaaccaatgttttctttgatgacttgaaccattac
acaaggattaaggcaatgtgcagactctcttgcaattcgtgtaaagagacaaacaagagt
catccaaagaaagggcctaaccattgtttgcggtttaagagcgttgaacacttgaaagat
catttaagccatcagcacaaactgcatatgtgcagtttatgtcttgtaggtcgtaaggtt
ttcatttgtgaacaaaagttgtttactaaggcacagctgaaccaacatataagtagtggt
gactcggaagtggatggaagtgagagtgaaagaggaggtttcactggtcatcctatgtgt
gagttctgtaaaagaccattctatggggataatgagctatacactcatatgtctagagag
cactacacttgtcatatatgccaaaggctgaagcctggacaatatgaatattatggaaac
tatgatgatctggaggttcatttcagaagtgaccatttcctatgtgaagacgaaacctgc
cttgctaagaagttcatagttttccaaatcgaagctgagttaaaaaggcataattctatt
gatcatggaggtagaatgtctcggtctcaacaaagtgcatcactacagatacaagccagt
ttccaataccagagcagtcgtcgtggaagacgccgatcatctcttcgtgagcctaatctt
gcggttctggaatctcaagcatcttatgccattaacgacggtaataatcttcttcaacat
gtggggcgctatggaggttcacgtcttggagaatcttcttttcctccactctctgtgcca
gcaaaccaaggccaatcaagatttgggcataactcggagagtttacttagtaacaccacg
actactcgtctaagacatcaaacaaatagaagtgcaacttctggttcttctcgagcttgg
ccagccctaaaccgaggtccgacagaaacatcaattacaagcagtgtacaatcttctggt
gcttctgctcaatctcaatctgggcaccatggcagagttgaaattactagaactcttgct
tctgcagttccacaggatgctcgtaatgaacataccacagttggtggatgctcatctggt
tcttctctgagttccgcgaatacatcaaagaggaataatcatcactcgtcttcaacccct
aaaatgtctgatacaagatcactggagcagccttctcattctgattctcctccaatttcc
gctgtgaaaaatcgcaggtcatcatccaccagtgcaagtgcagcgaacatccaagtagca
caaggtgtttctgatgtacagtctgacaataaaagtttggttgaaaaaatacatgccagc
cttggacacgatgaagagttattcatggccttcaagaatacatctggaaagtatcgtcat
ggttccatcgatgcaagaacttacttggaatatgtgaaaggttatggtttgtctcactta
gttctagacatggctagactctgccctgaccctcagaggcagaaggaactcattgatacc
cacaatgcctgcttgaaaggaggaaataaagggaaagctgtgaaggttgaaagtagcagt
gactccaagggggatagatttgttgatacagtgaggaagttacaattctctgacaaatct
caggacaaagacaaagacaaggatgcataccgttcagataaaggcaaaacaaaagtgacg
acgttggtgaattcttcatcggctggagtgggattaggtgacacaggcaagcaacctaag
aaaacttcaaagtttctcagaacacgtctaggagagaaatcaatggctgcagtactagat
cttaagaattctaacccagagcctgaagcagaacctaagaacgataactccaaaaggagc
cagaactctctcggtggattgccacttcgtggtgcttggaggagaggaagtgcaaaactc
ttcctctag

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