Arabidopsis lyrata (lyrate rockcress): 9316350
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Entry
9316350 CDS
T01578
Name
(RefSeq) E3 ubiquitin-protein ligase hel2
KO
K22381
E3 ubiquitin-protein ligase ZNF598 [EC:
2.3.2.27
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9316350
Enzymes [BR:
aly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
9316350
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
9316350
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAH_ZNF598
zf-C2H2_13
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
9316350
NCBI-ProteinID:
XP_020883416
LinkDB
All DBs
Position
Unknown
AA seq
742 aa
AA seq
DB search
MDDSCAVCAENLEWVGYGSCGHREVCSTCVVRLRFILDDRRCCICKTECPVVFVTKALGD
YTKTISDFSTTFPSVLKEGRVGSFWYHEETNVFFDDLNHYTRIKAMCRLSCNSCKETNKS
HPKKGPNHCLRFKSVEHLKDHLSHQHKLHMCSLCLVGRKVFICEQKLFTKAQLNQHISSG
DSEVDGSESERGGFTGHPMCEFCKRPFYGDNELYTHMSREHYTCHICQRLKPGQYEYYGN
YDDLEVHFRSDHFLCEDETCLAKKFIVFQIEAELKRHNSIDHGGRMSRSQQSASLQIQAS
FQYQSSRRGRRRSSLREPNLAVLESQASYAINDGNNLLQHVGRYGGSRLGESSFPPLSVP
ANQGQSRFGHNSESLLSNTTTTRLRHQTNRSATSGSSRAWPALNRGPTETSITSSVQSSG
ASAQSQSGHHGRVEITRTLASAVPQDARNEHTTVGGCSSGSSLSSANTSKRNNHHSSSTP
KMSDTRSLEQPSHSDSPPISAVKNRRSSSTSASAANIQVAQGVSDVQSDNKSLVEKIHAS
LGHDEELFMAFKNTSGKYRHGSIDARTYLEYVKGYGLSHLVLDMARLCPDPQRQKELIDT
HNACLKGGNKGKAVKVESSSDSKGDRFVDTVRKLQFSDKSQDKDKDKDAYRSDKGKTKVT
TLVNSSSAGVGLGDTGKQPKKTSKFLRTRLGEKSMAAVLDLKNSNPEPEAEPKNDNSKRS
QNSLGGLPLRGAWRRGSAKLFL
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggatgatagttgcgccgtttgcgcggagaatctcgaatgggttggttacggatcttgt
ggtcacagagaggtttgctctacttgtgtcgttcgtcttcgtttcatactcgatgatcgt
cgatgttgtatctgcaaaaccgaatgccccgtcgtcttcgtcacaaaggctttgggtgat
tatacaaagacgattagtgatttctccactacttttccatcagtattaaaggaaggtcga
gtaggatctttctggtatcatgaagaaaccaatgttttctttgatgacttgaaccattac
acaaggattaaggcaatgtgcagactctcttgcaattcgtgtaaagagacaaacaagagt
catccaaagaaagggcctaaccattgtttgcggtttaagagcgttgaacacttgaaagat
catttaagccatcagcacaaactgcatatgtgcagtttatgtcttgtaggtcgtaaggtt
ttcatttgtgaacaaaagttgtttactaaggcacagctgaaccaacatataagtagtggt
gactcggaagtggatggaagtgagagtgaaagaggaggtttcactggtcatcctatgtgt
gagttctgtaaaagaccattctatggggataatgagctatacactcatatgtctagagag
cactacacttgtcatatatgccaaaggctgaagcctggacaatatgaatattatggaaac
tatgatgatctggaggttcatttcagaagtgaccatttcctatgtgaagacgaaacctgc
cttgctaagaagttcatagttttccaaatcgaagctgagttaaaaaggcataattctatt
gatcatggaggtagaatgtctcggtctcaacaaagtgcatcactacagatacaagccagt
ttccaataccagagcagtcgtcgtggaagacgccgatcatctcttcgtgagcctaatctt
gcggttctggaatctcaagcatcttatgccattaacgacggtaataatcttcttcaacat
gtggggcgctatggaggttcacgtcttggagaatcttcttttcctccactctctgtgcca
gcaaaccaaggccaatcaagatttgggcataactcggagagtttacttagtaacaccacg
actactcgtctaagacatcaaacaaatagaagtgcaacttctggttcttctcgagcttgg
ccagccctaaaccgaggtccgacagaaacatcaattacaagcagtgtacaatcttctggt
gcttctgctcaatctcaatctgggcaccatggcagagttgaaattactagaactcttgct
tctgcagttccacaggatgctcgtaatgaacataccacagttggtggatgctcatctggt
tcttctctgagttccgcgaatacatcaaagaggaataatcatcactcgtcttcaacccct
aaaatgtctgatacaagatcactggagcagccttctcattctgattctcctccaatttcc
gctgtgaaaaatcgcaggtcatcatccaccagtgcaagtgcagcgaacatccaagtagca
caaggtgtttctgatgtacagtctgacaataaaagtttggttgaaaaaatacatgccagc
cttggacacgatgaagagttattcatggccttcaagaatacatctggaaagtatcgtcat
ggttccatcgatgcaagaacttacttggaatatgtgaaaggttatggtttgtctcactta
gttctagacatggctagactctgccctgaccctcagaggcagaaggaactcattgatacc
cacaatgcctgcttgaaaggaggaaataaagggaaagctgtgaaggttgaaagtagcagt
gactccaagggggatagatttgttgatacagtgaggaagttacaattctctgacaaatct
caggacaaagacaaagacaaggatgcataccgttcagataaaggcaaaacaaaagtgacg
acgttggtgaattcttcatcggctggagtgggattaggtgacacaggcaagcaacctaag
aaaacttcaaagtttctcagaacacgtctaggagagaaatcaatggctgcagtactagat
cttaagaattctaacccagagcctgaagcagaacctaagaacgataactccaaaaggagc
cagaactctctcggtggattgccacttcgtggtgcttggaggagaggaagtgcaaaactc
ttcctctag
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