Arabidopsis lyrata (lyrate rockcress): 9316385
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Entry
9316385 CDS
T01578
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2 isoform X1
KO
K11096
small nuclear ribonucleoprotein D2
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
9316385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aly03041
]
9316385
03032 DNA replication proteins [BR:
aly03032
]
9316385
Spliceosome [BR:
aly03041
]
Complex A
U1 snRNP components
Sm proteins
9316385
U2 snRNP components
9316385
Complex B
U1 snRNP components
9316385
U4/U6.U5 tri-snRNP components
9316385
Complex C
U2 snRNP components
9316385
DNA replication proteins [BR:
aly03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
9316385
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
9316385
NCBI-ProteinID:
XP_020883169
LinkDB
All DBs
Position
Unknown
AA seq
109 aa
AA seq
DB search
MSKPMEEDTNQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNM
VLENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK
NT seq
330 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagccaatggaagaggataccaatcagggaaagactgaggaagaggaattcaac
accgggccactctctgttcttatgatgagcgtgaagaataacactcaggttttaatcaat
tgccggaacaacaggaaacttcttgggcgagtgagagcgtttgacagacactgcaacatg
gttcttgaaaatgtcagagagatgtggactgaggttccgaaaactgggaaaggaaagaag
aaagcacttccggtgaacagagatcggttcataagcaagatgtttctacgtggagactca
gtcattatcgtcctcaggaatccaaaatga
DBGET
integrated database retrieval system
