Arabidopsis lyrata (lyrate rockcress): 9316446
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Entry
9316446 CDS
T01578
Name
(RefSeq) RNA-binding protein 28 isoform X1
KO
K14573
nucleolar protein 4
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
9316446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aly03009
]
9316446
Ribosome biogenesis [BR:
aly03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
9316446
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
9316446
NCBI-ProteinID:
XP_020884067
LinkDB
All DBs
Position
Unknown
AA seq
988 aa
AA seq
DB search
MGKNKRERKDGEEKSPQSATTVCVSGLPYSITNAQLEEAFSEVGPVRRCYLITNKGSNEH
RGFAFVTFALPEDVNRAIELKNGSTFGGRRITVKQATNRPSLKERRTKAVQGISLPDDSQ
AQSDKDTLIPETDEKVPPPETKVEKPIERKKVEKPIESKKVEKPIERKKVEKPIESKKVE
KPIERKQVEKPIERKGPTKLHVDLPDKETCSDKQRVARTVIFGGLANAEMAEVVHSRVKE
IGTVCSVRYPLPKEELQQNGLTQDGCRAEASAVLFTSVKSACAVVAKLHQTEIKGNLIWA
RQLGGEGSKAQKWKLIIRNLPFQAKPSDIKEVFSAVGFVWDVFIPKNFETGLPKGFAFVK
FTCKKDAENAIQMFNGHMFGKRPIAVDWAVPKNLYNGAADATTASADGDQKGSDGDSDNS
SVDLEEVDDAVESHPPSGDDTDDEEEDGSNKLSESDALEKDVGTDVNFKEEADVARKVLK
NLLASSKGSIASPDGETEESDKSKLKNSSTKPVADSSGVSEPLKSGKTKEVAPKETQENE
HFERTLFIRNIPFDVTKEEVKQKFAVFGEVESLFLVLNKVTKRPEGTAFLKFKKADASVA
AISAANTASGVGVLLKGRQLNVMRAVGKKAAHDIELKKTEEKNVDHRNLYLAKEGQILDD
SPAAEGVSAEDMDRRRRLHENKMKKLQSPNFHVSRTRLVIYNLPKSMNQKQLHKLLVDAV
TSRATKQKPGIRQIKFLQNEKKGKVDTKNYSRGVAFVEFTEHEHALVALRVLNNNPETFG
PQHRPVIEFAVDNVQKLKIREAKQQQFQQRDKHNESEQQQSNGEAQAPDNKYKRKTREGD
NSGPRKENAARFKKGPGRPGVESKEEAKSNIAVKDDAAEKKRPIRTQEKPSSNKKGQLMR
QKETTEKPNPKISKDLREPRKRKFGEDRGEENINGQRKRKKKQGQGGAEVVDKLDMLIEQ
YRSKFSQSSAKTGPQKQSSGQVRRWFES
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaaacaagagagagaggaaagatggagaagaaaaatctccacagtctgccacc
actgtttgcgtgtctggcttgccttattccatcaccaacgctcagcttgaagaagccttt
agtgaagttggtcccgtcaggcgttgctatctgatcacaaataagggttctaatgaacac
cgtggctttgcgtttgttacatttgctttaccagaagatgttaaccgtgccattgagttg
aagaacggttctacttttgggggccgtaggattactgttaaacaagccacaaatcgacct
tctcttaaagagcgtcgaactaaagcagttcaaggaatctctttacctgatgattcccag
gcacagagtgacaaggacactttgatccccgagacagacgagaaagttcctccacctgaa
acaaaagtagagaagccaattgagcgcaagaaagtagagaagccaattgagagcaaaaaa
gtagagaagccaattgagcgaaaaaaagtagagaagccaattgagagcaaaaaagtagag
aagccaattgagcgcaaacaagtagagaagccaattgagcgcaaaggaccaacaaagctt
catgttgatttacctgataaagaaacatgttcagataagcaaagagttgcaagaactgta
atatttggtgggcttgctaatgctgagatggcagaggtagtccatagtcgagtcaaagaa
attgggactgtgtgctctgtcagatatcccctacccaaagaagagctccaacaaaatggt
cttacccaagatggatgcagggcagaagcatcagctgttctctttacgagtgtcaaatct
gcttgtgccgttgttgcaaaattacatcaaacagagataaagggaaatctcatttgggct
cgtcagcttggtggggagggttcaaaggctcagaagtggaaactaattatacgaaatctt
cctttccaggctaaacctagtgacattaaagaggtcttttcagcagtagggtttgtctgg
gatgtttttattcctaaaaattttgaaactgggctacctaagggttttgcatttgtcaaa
ttcacgtgtaagaaagatgcagaaaatgcaattcaaatgttcaatgggcacatgtttggt
aaaaggcctatagctgtagactgggctgtacctaagaatctttacaatggtgctgctgat
gccactactgcttcagcagatggtgaccaaaaaggaagcgacggggacagtgataacagt
agtgttgatttggaggaggttgatgatgctgtagaaagtcacccaccttcaggagatgat
actgatgatgaggaggaggatggcagtaacaaactgagtgaatcagatgcactggagaaa
gatgttgggaccgatgtgaattttaaagaggaagcagatgttgcgagaaaggttcttaag
aacttgcttgcgtcttcaaaaggttctattgcttctcctgatggtgagacagaggagtcg
gataaaagcaaacttaaaaattcatcaactaagccagtcgctgactcttctggtgtctct
gaacctttgaaatccggtaaaactaaagaggtggctcctaaagaaacgcaggaaaatgag
cattttgagagaactttatttataagaaacatcccatttgatgttactaaggaagaagtc
aaacagaagtttgctgtatttggggaagttgaatctttattcctggttctcaacaaggtc
acaaaacggccagaagggactgcttttctcaagttcaaaaaagcagatgcatcagttgca
gccatatcagctgccaatactgcctcaggtgtcggtgtccttcttaaaggcagacaactg
aacgttatgagagctgtgggtaagaaagctgcacatgacatagaactcaaaaagacagag
gagaagaatgttgaccatcggaatctttatcttgctaaggaaggtcagatccttgatgat
tcacctgctgctgagggtgtgtctgcggaagatatggacaggcgacgaagattgcatgaa
aacaaaatgaaaaagcttcagtctcctaacttccatgtatctcgaacaaggcttgtgatc
tataatttgcccaaatccatgaatcaaaagcaactacacaagctcttagttgatgctgtt
acctcacgagctacaaagcagaagccgggtattcgacagatcaagttcttacaaaatgag
aagaagggtaaagttgatactaagaactactcccgtggagttgcctttgtcgagttcacg
gagcatgaacatgctctagtggccctgagagtacttaacaacaatcctgaaacatttggt
ccccagcaccgccctgttatagaatttgctgttgataatgtccagaagctgaagatacga
gaagctaagcagcagcagtttcagcaacgtgataaacacaatgaatctgagcagcagcag
tcgaatggcgaagcgcaggcacctgacaataaatacaaacgaaaaacgagggaaggggat
aacagtggtccaaggaaagagaacgcagccaggtttaagaagggacctggtcgcccaggt
gtagagagtaaagaagaagcaaaatccaatatagcagtaaaggatgatgcagcagagaag
aagagacctatacgcacacaggaaaaaccgtcttcaaacaagaaaggccaattgatgaga
cagaaagagacaactgagaaaccaaatccaaagatttccaaagatttgagggaaccaaga
aaaaggaagtttggggaggatagaggtgaagagaatataaatggacagaggaagaggaag
aagaagcaaggtcaaggtggtgcagaggttgtggacaaacttgatatgttgattgagcaa
tacaggtctaagttctcgcagagctcagccaaaaccggcccacaaaaacagagttccggt
caagtcaggaggtggttcgaatcctga
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