Arabidopsis lyrata (lyrate rockcress): 9316447
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Entry
9316447 CDS
T01578
Name
(RefSeq) protein CHROMATIN REMODELING 35 isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
9316447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aly03400
]
9316447
DNA repair and recombination proteins [BR:
aly03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
9316447
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
9316447
NCBI-ProteinID:
XP_020882742
LinkDB
All DBs
Position
Unknown
AA seq
811 aa
AA seq
DB search
MVGTNHFPFSKPRETPWTLRSRSRSITQEELAKRPDPFSVPNLLDGLEDGVYGCLADNVK
RLCKLRQEYLNGSISLEDIEAREEKKPSKLPQESVTPLYKRLKKLKEVIVVKNGDSSGSD
MSPQGYDEEDSSSNSTDIDNQSPLYVDAEEEEELWRQMAFAQESIKVTVEDSQSNDHKQV
EDCDHSFICKDDIGEVCRVCGLIKKPIESMIEVVFNKPKRSRRTYMREKENGETSRAFSG
IQSSQTNILGEKMFIHPWHDQEMRPHQTEGFRFLCNNLAADEPGGCILAHAPGSGKTFLL
ISFLQSFMAMDPQARPLIVLPKGIIESWKREFTLWEVEKIPLLDFYSVKAESRKQQLKVL
GQWLKERSILFLGYQQFTRIICDDKNFEAASEDCKLILLEKPTLLILDEGHTSRNKETNM
LISLARVKTPRKVVLTGTLFQNNVEEVFNILNLVRPKFLKRPGTREIVSRIMSKAEIPRG
KQVNQSSIEGTFFAAVELTLQKSIDFSAKASLIKDLREMTRNILHYHKADFSGLLPGLSE
FTVMLNLSSIQRDEIKGLRKMELFKQISLGAALYIHPKLKSFLEENPSNGEKGFADNNAT
VMKLDKMLKKINVRDGVKMKFFLNLLALCESTGEKLLVFSQYIVPIKTLERLMSSMKGWR
LGKEMFTITGDSSNEQREWSMERFNNSPEAKVFFGSIKACGEGISLVGASRVLILDVHLN
PSVTQQAVARAYRPGQKRKVYAYKLVAAESPEEENYETCTRKEMMSKMWFEWNVGSGRGD
FGLRAIDVDHSGDAFLETTKMKEDIKCLYTR
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggtgggtactaatcactttccattttcgaagccgagggagacgccttggactttgagg
tcacgtagcaggagcattactcaagaagaacttgccaagcgtcccgacccgttcagtgta
ccgaatcttcttgatgggcttgaagatggtgtatacggatgtcttgctgataatgttaag
agactttgtaagctgagacaggaatatttgaatggttctatctcactggaagatatcgaa
gctagagaagagaaaaaaccttccaagttgcctcaagaatcagttactcctctatataaa
aggctgaagaagctcaaggaagtgattgttgtgaagaatggagatagctcaggatctgac
atgagtccacaaggttatgacgaggaggattcatcgagtaattcaactgatattgacaat
caaagtcctctatatgtagatgcagaagaagaagaagagctttggaggcagatggctttt
gctcaagaatcaattaaggtaacggtggaggattcacaaagtaatgatcacaaacaagtc
gaagactgtgaccattccttcatctgcaaggacgatattggagaagtgtgtcgtgtttgt
ggactcatcaagaaaccaattgagagcatgattgaagttgtgttcaacaagccaaagaga
tcaagaagaacttatatgcgtgaaaaagaaaatggggaaacgagtagggccttctcagga
atccagtcttctcagacaaacattttgggagaaaaaatgttcattcacccatggcatgat
caggagatgaggcctcaccagactgaaggattcagatttttatgcaacaaccttgcagcg
gatgagccaggtggatgcatattagctcatgcaccaggatcaggcaagacatttctgctc
atcagctttctgcagagcttcatggctatggatccgcaggctagaccattgattgtgcta
ccgaaggggatcatagagtcatggaagagagagtttactttgtgggaagttgagaagatt
cccctgcttgatttctacagcgtgaaagcagaatcacggaagcagcaactgaaggttttg
gggcaatggctcaaggagagaagcattctgtttcttgggtaccaacagtttacgaggatc
atctgcgatgataagaattttgaggcagcttcagaagattgtaagctgatattgcttgag
aagccaacgttgcttatacttgatgagggtcatacgtcaaggaataaggagacgaacatg
cttatttcgcttgctcgtgtcaagactcctcgaaaggtggttctcacagggaccttgttc
caaaacaacgttgaggaagtgttcaacattttgaatcttgttcggcccaagttcttgaag
cgtcctggaactcgggagattgtttctcgtatcatgagcaaggcagagataccgagaggc
aaacaggtgaaccagagtagtatcgaggggactttcttcgctgcagtagagcttacatta
cagaagagtatagacttttctgccaaagccagcttgataaaggatctccgcgaaatgacc
cgtaatatcttgcattatcacaaagcagattttagcggcttgcttccggggcttagtgag
ttcactgtcatgctaaatttgagctcaattcagagagatgaaatcaagggtctgaggaaa
atggaactgttcaagcagatctctcttggtgctgctttgtatatacacccaaagctcaaa
tctttcttggaggaaaacccttccaacggggaaaaaggttttgctgataacaacgcaaca
gttatgaagctggacaagatgctgaagaagatcaatgtcagagatggtgtgaagatgaaa
ttcttcctcaacctcttagctctgtgtgaatcaacaggagagaagcttttggtgttcagc
caatacattgttccaataaagactcttgagagactgatgagctcaatgaaaggttggcgt
ttagggaaagagatgttcacaatcacaggtgattcaagcaatgaacagagagaatggtca
atggagagattcaacaattcaccagaggctaaagtgtttttcggatcgatcaaagcttgt
ggggaaggaatatcactagtgggtgcatcacgagttctgattcttgatgttcatctgaac
ccatcagtgactcagcaagccgtggctcgagcttatagaccaggacagaagaggaaagtg
tatgcgtacaagctcgtagctgcggagtcaccagaggaagagaactacgaaacgtgtacg
cgtaaagagatgatgtctaagatgtggttcgagtggaatgttggctcaggaagaggtgat
tttgggctaagagccattgatgttgatcactccggtgatgcgtttcttgaaacgaccaag
atgaaggaagatatcaagtgtttatacacaaggtaa
DBGET
integrated database retrieval system
