Arabidopsis lyrata (lyrate rockcress): 9316487
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Entry
9316487 CDS
T01578
Name
(RefSeq) crossover junction endonuclease EME1B
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03440
Homologous recombination
aly03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
9316487
03460 Fanconi anemia pathway
9316487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aly03400
]
9316487
DNA repair and recombination proteins [BR:
aly03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
9316487
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
EME1-MUS81_C
Motif
Other DBs
NCBI-GeneID:
9316487
NCBI-ProteinID:
XP_020884291
LinkDB
All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
MKDHILISDGEDQATPLQSLSKRARKDPISAILISDSDPTPQKQLPESSSTPLFVPDTPL
SDDLSVVKCSFGSGALASNREDKFSGKRIISLDSEFEDSPRPKSSKKYESVLAGFREPRF
GLEAGTSEAYYKNTRITETNLDDNTNWMHEVSFRSSQTNDTIEVDSDQEKEDISVEKMGR
KNKIRTTTLPGEALPKKQLSKADKTCAMEEKKLRKEQERLEKAALKAEEAERKRLEKEKK
KWEKGKLALKSIVAEIDTKVVEGSIGGLLLSRFSEKGITIHVGPNPIERSIVWTMTIPES
IAPLFPQGPKIPYVLLVYEAEEFCNLVANEKFLENISRVQDRYPFHTVCCLTNKLMSYVK
KREKEEYKNPGNWRRPPIDEVLAKLTTHYVKVHSRHCVDEAEVAEHVVGLTSSLASCQFR
KKLTMFSVSANGALVSKDSVDKHLIKKSPWLKALVAIPKVQPRYALAVWKKYPSMKSLLK
VYLDRNKSVHEKEFLLKDLKVEGLVGGDIRLGEVCSKRIYRVLMSHNGAIKTDDVENGAA
FFTVSPGVN
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatcacattctcatctccgacggagaagatcaggctactccacttcaatcactt
tcgaagcgtgctcgaaaagatcccatctctgcgatactgatttcggattcagatccgaca
ccgcagaagcaactgccggaatcttcttccactcctttgttcgtccctgatacacctctt
tccgatgatttatctgtcgtcaaatgttcctttggttctggagctttagcttctaaccgc
gaagacaaattctccggaaaacggataatatctctggattcggagtttgaagacagtcct
cgacctaaatcttcgaagaagtatgaatccgtgcttgctggttttagggagccacgtttt
ggattggaagctggaaccagtgaggcatactataagaatactagaataactgagacaaat
ttagatgataatactaattggatgcatgaagttagttttcgctcttcgcagactaatgat
actatcgaggttgattctgaccaagaaaaagaggatataagcgttgagaaaatgggtcga
aaaaataagatcagaactacaactcttccaggtgaggcattgccaaaaaagcagctgtcg
aaggcagacaaaacatgtgcaatggaggaaaagaagttaagaaaagagcaagagagatta
gagaaagcagccttaaaagcagaagaagctgagcgtaaaagattagagaaggaaaagaaa
aaatgggaaaaggggaagttagcccttaaatctattgttgccgagattgatactaaagtg
gttgaaggatccattggaggacttctgctttcaaggttctctgagaaaggcattacaatc
catgtaggccctaatccaattgagagatccattgtgtggacaatgacaattccagagagt
attgctccgctttttccccaagggccgaagattccttatgtgctacttgtatatgaagct
gaagaattttgtaatcttgttgctaatgaaaagtttctagaaaacatctcaagagttcag
gaccgatacccatttcatacggtgtgctgcctcaccaataagttaatgtcgtacgtaaag
aaaagggaaaaggaagagtacaaaaacccgggaaattggagacggcctcctatcgatgag
gtacttgcaaaattaactactcactatgttaaagtacattccagacactgtgtagacgag
gctgaggtggctgaacatgttgttggcctaacaagcagtctagcctcttgccaatttagg
aagaagttaactatgttctcagtaagcgctaatggtgcattagtctccaaggattcagtt
gacaagcacttgattaaaaagagtccatggttaaaagcgttagtagcaataccaaaggtg
cagccacgatacgctttagcagtgtggaagaaatatccctccatgaagtctcttcttaag
gtttatctggaccgtaacaaatcggttcatgagaaggagtttctactaaaagacttgaaa
gtggaaggtttagtgggaggagacataaggttgggtgaggtttgttcaaagcggatatac
agagttctcatgtctcacaatggagccattaagactgatgacgtcgaaaatggtgctgct
ttcttcacagtttctccaggtgttaattag
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