Arabidopsis lyrata (lyrate rockcress): 9316511
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Entry
9316511 CDS
T01578
Name
(RefSeq) monofunctional riboflavin biosynthesis protein RIBA 2, chloroplastic isoform X2
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00740
Riboflavin metabolism
aly00790
Folate biosynthesis
aly01100
Metabolic pathways
aly01110
Biosynthesis of secondary metabolites
aly01240
Biosynthesis of cofactors
Module
aly_M00125
Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
9316511
00790 Folate biosynthesis
9316511
Enzymes [BR:
aly01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
9316511
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
9316511
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
Motif
Other DBs
NCBI-GeneID:
9316511
NCBI-ProteinID:
XP_002878617
UniProt:
D7LE06
LinkDB
All DBs
Position
Unknown
AA seq
475 aa
AA seq
DB search
MASLTLRCDSTHLFPSRDVVKRTKPFRTSLVCPRIISKRFIVRMRVISEEGDVFSSSKSN
GSSMGVEMQPDLVSFGTLAAEMIPTTMDSPVVEDEEFDLDRPTDGFASIPQAIDDIRLGK
MVVVVDDEDRENEGDLIMAASLVTPEAMAFVVKHGTGIVCVSMKGEDLERLELPLMVTRK
DNEEKLHTAFTVSVDAKKGTSTGVSARDRAQTILTLASKDSKPEDFNRPGHIFPLRYREG
GVLKRAGHTEASVDLTVLAGLEPVSVLCEIVDDDGSMARLPRLRKFAQENNLKIISIADL
IRYRRKRERLVEFTAVAPIPTMWGPFRAHCFKSLLDGVEHIAMVKGEIGDGKDILVRVHA
ECITDDIFGNSSGGKQLAIAMRLIEETGRGVFVYLRGPESKGIDLSHKPRTYNTNSDQAE
GVSFPVASREYGIGAQILRDLGVREMKVMTNNPAHYVGLKGYGLSISGKVPLVTP
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctcttactctccgatgcgactcgacccatctttttccttcgcgtgatgttgtc
aagagaacaaaaccatttagaacgagcttggtgtgtcctaggattatatcaaagaggttt
attgttagaatgagagtgatatctgaggaaggagatgtgttctcttcctctaagagtaat
ggatcatcaatgggggttgagatgcagccggatttggtatcgtttggaacattagcagct
gaaatgattcccacaacaatggattctcctgttgttgaggatgaagagtttgatttagat
cgacctactgatggatttgcgtctattcctcaagctattgacgatatacgactgggcaag
atggtagttgttgtagatgatgaagatagagaaaacgaaggagatttgatcatggcggca
tcgttggtaacacctgaagctatggcttttgttgtaaagcatgggactggaatcgtgtgt
gtgagcatgaaaggcgaagacttggagaggttagagcttcctttaatggtgacccgaaag
gataacgaggaaaaactccatacggcctttacggtttcagtggacgcgaaaaagggaaca
tccacaggtgtctcagctcgtgatagggcgcaaacaatattaacccttgcatcaaaagat
tcaaaacctgaagatttcaatcgtcctggtcatatatttcctttgagatacagagaaggt
ggtgttcttaaaagagcagggcatacagaagcctctgttgacttgactgttttggctggt
ttagaaccagtatcggttttatgtgagattgtagatgatgatggttccatggctagatta
ccaagactccgcaaatttgctcaagagaacaacttgaaaataatttcaatcgcagattta
atcagataccgaaggaaaagagagagactggtagagtttactgcggttgcgcctataccg
acaatgtggggaccattcagagcacattgctttaagtcattacttgatggagttgagcac
attgcaatggtcaagggagaaatcggagatgggaaggatattctagtgagagtacacgcg
gagtgtatcacggatgatatattcggaaatagctccggtggaaaacagttagcgattgca
atgagactgattgaagaaactgggagaggtgtttttgtctacttacgtggtcctgaaagt
aaaggcattgatctaagccataagcctcgtacttacaacaccaattcagatcaagccgaa
ggtgtttcatttcccgttgcttcacgggaatacggcattggagcacaaattctaagggat
cttggagttagagagatgaaagtgatgacgaataatccagcacattacgttggtcttaaa
ggctatggtttatcaatttctggtaaggttccactcgttactccgtaa
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