Arabidopsis lyrata (lyrate rockcress): 9316523
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Entry
9316523 CDS
T01578
Name
(RefSeq) probable sphingolipid transporter spinster homolog 3 isoform X1
KO
K23677
MFS transporter, Spinster family, sphingosine-1-phosphate transporter
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aly02000
]
9316523
Transporters [BR:
aly02000
]
Major facilitator superfamily (MFS)
Lipid transporters
Sphingosine-1-phosphate transporter (Spinster) family [TC:
2.A.1.49
]
9316523
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MFS_1
OATP
DUF5823
MFS_3
Motif
Other DBs
NCBI-GeneID:
9316523
NCBI-ProteinID:
XP_020884142
LinkDB
All DBs
Position
Unknown
AA seq
532 aa
AA seq
DB search
MVVTKEEDCLPPATETPRCYSPSSTTPLAELETVRSIEIVESSFLSPVWLLVIFCIINLL
NYMDRGAIASNGVNGSTRSCNDKGKCTLATGIQGHFNLSNFEDGVLSSSFMVGLLIASPI
FASLAKSFNPFRLIGVGLTVWTIAVLGCGSSFAFWFIVLCRMFVGVGEASFISLAAPFID
ENAPQKQKAAWLGLFYMCIPSGVALGYVYGGYVGKHISWRYAFWGEAVLMAPFAVLGFLM
KPLQLKGFPSSDSIKTVRSIEVIASSVGSETSKNNNRLQVGNEIEHDQFEVSIETSKSSY
AKAVLNSFTGFAKDMKVLYKEKVFVVNVLGYVSYNFVIGAYSYWGPKAGYNIYKMKNADM
IFGAVTIICGIVGTLSGGFLLDRVTATIPNAFKLLSGATFLGAVFCFTAFTLKSLYGFIA
LFALGELLVFATQAPVNYVCLHCVKPSLRPLSMAISTVAIHIFGDVPSSPLVGIVQDHIN
SWRKTALILTSILFLAAAIWLIGIFINSVDRFNQEETGSENTRRQELSILTP
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggtggtcaccaaagaagaagattgtcttcctcctgcgacggagacgccgagatgttat
tctccttcatctactactcctcttgcggagttagagactgttcgaagcatagaaatcgtc
gaatcttcctttctctctcccgtttggttactagtgatcttttgcatcattaacttgtta
aactacatggatcgtggtgcgatagcgagcaacggtgtcaatggaagtactaggagttgt
aatgataaaggcaaatgcactcttgcaactggaattcagggacattttaacctaagtaat
ttcgaagatggtgtattgtcatcttcatttatggttggacttcttattgcatcaccaatc
tttgcttcattggcaaaaagtttcaatccatttagacttattggagtaggtttaactgtt
tggactattgcagttcttggttgtggcagttcctttgccttttggtttatcgtcttatgt
cgtatgttcgttggtgtaggtgaagcttctttcattagtcttgcagctccatttatagat
gaaaatgctcctcaaaaacagaaagctgcatggctgggactgttttacatgtgtatacca
agtggtgttgctcttggttatgtctatggcggatacgtcggaaaacatattagttggcgc
tatgcgttttggggtgaagctgttttaatggctccatttgctgtccttggttttttaatg
aaacctttgcagttaaaagggtttccttctagtgattcgataaagacggttagatcaatt
gaagtaatcgcttcatcagtaggctcagagacatcgaaaaacaacaatcgtcttcaggtt
ggtaatgagattgagcatgatcagtttgaggtctcaattgaaactagcaagtcaagttat
gcgaaagcggttttaaattcatttactggatttgcaaaagacatgaaagttctgtataaa
gaaaaggtctttgttgttaatgtattaggttatgtatcatacaattttgttataggagca
tactcatattggggaccaaaggcgggttataatatttataagatgaaaaacgcggatatg
atcttcggggcagtaactatcatttgtgggatcgttggaacattatcaggaggctttcta
cttgatcgcgtcactgcgacaattccaaatgcttttaagctcttatccggagcaacattt
ctcggggcggtattttgcttcactgcatttaccctgaagagtttatacggtttcatcgct
ctctttgccttaggagagcttcttgtgtttgcaacacaggctcctgtgaattatgtgtgt
ttgcattgtgtgaaaccaagtttacgaccattatcaatggctatctccaccgtcgcaatt
cacatattcggcgatgttccttcttcgcctcttgtcggtatcgttcaggatcatatcaac
agttggagaaaaacggcgttgattcttacatcgattctgttcttagctgctgcaatatgg
cttatagggatattcataaacagtgtagatcggtttaatcaagaagaaactggaagtgag
aacacaaggaggcaagaactatcgattctaactccataa
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integrated database retrieval system
