Arabidopsis lyrata (lyrate rockcress): 9316595
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Entry
9316595 CDS
T01578
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase large subunit 2
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00900
Terpenoid backbone biosynthesis
aly01100
Metabolic pathways
aly01110
Biosynthesis of secondary metabolites
Module
aly_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
9316595
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
aly01006
]
9316595
Enzymes [BR:
aly01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
9316595
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
9316595
2.5.1.29 geranylgeranyl diphosphate synthase
9316595
Prenyltransferases [BR:
aly01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
9316595
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
9316595
NCBI-ProteinID:
XP_002880528
UniProt:
D7LG26
LinkDB
All DBs
Position
Unknown
AA seq
372 aa
AA seq
DB search
MEPQTLFLYLSLLILSLNFFFTNLKPRLVRLFQPSLESRVKTALLSRKEVAEFLDSPIVE
DEKAEEEEEDIVSNANFTFEFDPYMISKAESVNKALDEAIPVGEPLKIHEAMRYAILAAG
KRVRPILCLASCELVGGQENAAMPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKV
YGEGVAILSGGALLSLAFEHMTTAEISSERMVWAVRELARSIGTRGLVAGQAMDISSEGL
DLNEVGLEHLEFIHVHKTAVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDI
LDETKSSEELGKTAGKDQLTGKLTYPKLMGLEKSKEFVKRLTKDARQHLQGFSSEKVAPL
VALTTFIANRNK
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggaaccacaaactctttttctctatctctcacttctcattctctccctaaacttcttc
ttcacgaatcttaaaccaaggctagtccgcctcttccagccttctttggaatctcgtgtc
aagaccgccctattatcccgaaaagaagtagccgagtttcttgattctcccattgtagaa
gacgaaaaagcggaagaagaagaagaagatatcgtttcaaatgccaacttcacgtttgaa
tttgatccatacatgataagcaaagccgaatcagtgaacaaagctctagacgaagccatt
ccagtcggagagccactcaagatccacgaagccatgcgttacgcgattcttgcggctgga
aaacgtgttaggccaatactctgtcttgcttcttgcgagctagtaggcggtcaagaaaac
gccgcaatgcctgcggcttgtgcggttgagatgatccacacgatgtctctaatcaaagac
gatttgccttgtatggacaacgatgatttgcgtcgtggaaagcccacgacgcataaagtc
tacggtgagggagttgccattctctctggtggggctctcttgtctcttgccttcgagcac
atgacgacggctgagatatcttcggagagaatggtttgggcagtgagagaattggctagg
tctattggtacaagaggtttagtcgcgggacaagcgatggatataagcagtgaaggtttg
gacttaaacgaagtcggattagagcatttggagtttatccatgtccataaaaccgcggtt
ttgttggaaactgccgcggttcttggagccattattggtggtggatctgatgaagagatt
gaaagtgtgagaaagtttgcaaggtgcattggattgttgtttcaggtggtggatgatatt
ttggacgagacaaagtcatcggaagaattgggaaaaaccgccggaaaagatcagctcacc
ggaaagctaacgtatccgaagttgatggggttggagaaatcgaaagaatttgttaagaga
ttgacgaaagatgcacggcaacatcttcaagggtttagttctgaaaaggttgctccttta
gtagctcttactacttttattgctaatagaaataagtga
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