Arabidopsis lyrata (lyrate rockcress): 9316746 Help Entry 9316746           CDS       T01578                                  Name (RefSeq) protein TOPLESS isoform X1   KO K14558   periodic tryptophan protein 2 Organism aly  Arabidopsis lyrata (lyrate rockcress) Pathway aly03008   Ribosome biogenesis in eukaryotes Brite KEGG Orthology (KO) [BR:aly00001]  09120 Genetic Information Processing   09122 Translation    03008 Ribosome biogenesis in eukaryotes     9316746  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:aly03009]     9316746 Ribosome biogenesis [BR:aly03009]  Eukaryotic type   90S particles    U3 small nucleolar RNA-associated proteins     9316746 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TPR1-like_2nd WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz LisH_TPL WD40 ANAPC4_WD40 WDR55 Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_EML WDR90_beta-prop_4th Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_2nd EIF3I Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_TEP1_2nd Beta-prop_RIG_1st Beta-prop_NUP159_NUP214 Motif Other DBs NCBI-GeneID:  9316746 NCBI-ProteinID:  XP_020885371 LinkDB All DBs Position Unknown AA seq 754 aa AA seqDB search MILDEKNRKNLVFLILQFFDEEGYEESLHLLEQDSRVFFDFSYFSNAILNGNFKEADDYL LAFTRPEANTYSRKMFFDLFKRKLSEAPDRSGGSEAVSIFSKDLRRIPVLKDDSFDDLVE VIAVDDMRILEGTCCVDKVPGRAKLCVDLHKLAESNPCLCDKLEFPSLNKSALLSLISLI CPNCSGRNGGLKEDLICLILQFLYEAKYKNTLHKLEQETKVFFNLNYLAEVMKLGEYGKA EEYLGAFTDSKDNKYSKAMFLEIQKLTCLQSTEWEVATPSGSLDNMSPKIKLHASVAMLA KKNPVLKDKLKFPSMEKSRLLTLMKQTMDWWTSRTCNNSSSLENVPVVSYLCGTPFSLKK KFNKTGQRKKVVNYKPNEINDPSQCNALVLPDYFSEEMIARLTYSPSGDYILALAEDATH KLWTWSSSQNEFSKYTPRILKENVFPKPRLHQPQSGKTMKNEMAASVQNSTSCFAIKGSY LFSTSGGKIAVFDLKSFEKVAAFGSPTPMATYFIFIPGDLLAVGLDDGSIFIHCLSSRKV KEKLEGHDQKITCLAFSRCFNVLVSSDSDGKLCLWSTKSWVKLTSKNSTRKFCTRSNHES TSLVTHIQFDPYQIELLVVHEGWIGIYEARTLDCRLQWIPDESDTSITSATYSSDGEIIY AGFRSGFIKIVDSRTFMTVCRINMTSLTQPSPNNIRLEVYPTVVAAHPSHPSQISAGLSN GKVIVLQPLWSGGWGEAAPLEDNGDYSNDSDHSY NT seq 2265 nt NT seq  +upstreamnt  +downstreamnt atgatcttagacgagaaaaatcggaaaaatctcgtattcctaatcttacagttctttgat gaagaaggctacgaagaaagcttacacttattggagcaggattcaagagttttcttcgat tttagttacttctccaatgcaatcctcaatggtaactttaaagaagcagatgactatctt ttagcattcactcgtccagaagcaaatacatattcaaggaagatgttctttgacttgttc aagcggaaattatccgaagcaccggataggagtggtggctctgaagctgtgagcatattc tctaaggatttgagacggattcctgttttaaaagatgatagcttcgacgatttggttgag gtgattgctgtagatgatatgaggattctggagggaacttgttgtgtggacaaagtaccg ggaagagctaaattgtgtgttgatctacataaactagcagaaagcaatccttgtttatgt gacaaactcgaatttccgagcttgaataaatctgcattgctgtcacttatctcccttatt tgtccaaattgtagtgggagaaacggaggtttgaaggaagatctcatttgcttaatcctt cagtttctctatgaagccaagtacaagaacactctgcataagttagagcaagaaacaaaa gtcttcttcaacttaaattatctggcggaagtgatgaagctcggtgaatatggcaaagct gaagagtacctgggagcttttacagactcaaaagataacaagtactcaaaggctatgttt cttgaaatccagaaacttacatgcctacaatctacagaatgggaggttgcaaccccatct ggatctcttgataacatgtcgccgaagataaagctacatgcctctgttgccatgctagcg aagaagaatcccgtactgaaagataaactcaagtttcctagcatggaaaagtcaagactt ttaacactgatgaagcagactatggactggtggacttctcgtacatgcaacaattctagt tctctggaaaatgttccagtagtgtcatacctttgtggcacaccattctctttgaaaaaa aaattcaataaaacagggcaaaggaagaaggttgttaactacaaaccaaacgaaatcaat gatccatctcagtgcaatgcactcgttcttcctgattatttctcagaagagatgattgca cgtttgacctattccccttctggagattatatactggctttggcagaagacgccacacat aaactctggacgtggtcgagtagccaaaatgaattctccaagtatactcctcgaatattg aaggaaaatgtatttccgaagccacgattacatcaacctcaaagtgggaaaactatgaaa aacgagatggccgcctctgttcagaattcaacgtcatgtttcgctatcaagggttcctat cttttctctacttcaggaggaaaaatagcagtttttgatctaaagagttttgagaaggta gctgcttttggaagtcctacacctatggctacgtattttatatttattcctggtgatttg cttgctgtcgggctagatgatggttctatctttatccattgtttatcctcgagaaaggtc aaagaaaagctggagggccacgatcagaaaataacctgcctagcattttcacgctgtttt aatgtccttgtctcatctgactctgatggaaagctctgtctttggagcacaaagagttgg gttaagctaacaagtaagaactctacgcgtaagttctgcacccggtctaaccatgagtcc acctctttagtaactcacatccagtttgacccatatcaaattgagctacttgtggtccat gagggttggataggtatatacgaagctcgaactcttgattgccgtttgcagtggataccc gatgaatctgatacttcaataacttccgctacatattcttccgatggtgagatcatctat gctggctttagaagtggatttataaaaattgtggactccaggaccttcatgacggtatgt cgaatcaatatgacttctcttactcaacccagccccaacaacatcaggctcgaggtttat ccgactgttgttgccgctcatccttcacatccgagtcagatctctgctggactcagtaat ggtaaggtcatcgtccttcagccgttgtggagtggaggatggggtgaagcagctcccctt gaagacaatggagattattctaatgactcagatcatagttactga

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