Arabidopsis lyrata (lyrate rockcress): 9316768
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Entry
9316768 CDS
T01578
Name
(RefSeq) uncharacterized protein LOC9316768
KO
K19027
zinc finger FYVE domain-containing protein 26
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aly03400
]
9316768
DNA repair and recombination proteins [BR:
aly03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
9316768
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_ZFYVE26
TPR_2
Motif
Other DBs
NCBI-GeneID:
9316768
NCBI-ProteinID:
XP_020883025
LinkDB
All DBs
Position
Unknown
AA seq
2486 aa
AA seq
DB search
MDSETEILSRLAANHLHLAQFEPLKATLLALRVRNPDLALTILQTIVSNAGRFDNVLWSR
SCPSPSLLSFLSTIELLRFENPTSPWGFDSETLSLRADFLLMVQVLIDRVTERIKEDQES
EDENGGLGNCLRVLQGVLELGVERLKFDVDTSSSEGSNKIEEDAVVSLRSIVLDYSDVFD
ALCCNIQRQLARCESYDTCLVEEVQGEEQGKGINEATCIGSPELDNINVFALIQRNVQLA
QLDAMKTKLDEGDVRGAADRIRYLHLDYGVEKENYHAVLKALLSRGMEKKDEYGDSWHMV
RQNLLFIYKEALSSNCGDLVQMIQGIQDDILLPESQLHLSLDNEQIPLPLEYFQRYLVDL
KTERNIEDKSSPMRRAINSCLRDMYHYARISGSHVLECVMCAALSSVKKEKIQEANDVLT
LFPRLRPLVASMGWDLLPGKTATRRKLMRLLSTSDSQAIRLEESSLYGNQTDEKSCVEHL
CDTLCYQLELASFAACVNSGKSWTPKASFLMYGNVSPANDDAEVDPFVENLVLERLSAQS
PLRVLFDVVPGIKFQEAISLISMQPIASTAEAWKRIEDIELMHMRYALEAIVLALGALEE
AMKDNTDASHQVVFYHLKDLTNHLEAIKNVPRKIMMVNIVISLLHIDDIHLSSTQSASSE
CFSEKSNTPGLDLGDLDTKGEKEIVISFTKQLLDVLRRNLPSHLIEQECQLDGNYSTDGR
QALEWRVSLAKRFIDDCEWRLSVMQHLLPLSERQWGLKDVLSVLRAAPEKLLNLCMQRAK
YDIGEQAVHRFALSAEDKATLELAEWVDNAFKGTLVEDVMSRTAEGASAVQDLDFHSLGS
QLSPLAMILLCIDAAASSAKSPTISKQLLDKSQVMLSEIYPGGSPKVGFTYWDQVHEVAI
ISVLRRILKRLQEFLEQDNPQILQASFSGDTIISSCMESHRQGQNDRALAMLHQMIEDAH
RGKRQFLSGKLHNLARALADEKPEVDVLKGDGSDMAIEKDGVLGLGLKYTKQSPGSANRD
VDGNPASHETEDKGKKTLGPLSNKTSTYLSQFILYIAAIGDIVDGTDTTHDFNFFSLVYE
WPKDLLTRLVFDRSSTDAAAKVAEVMSADFVHEVISACVPPVYPPRSGHGWACIPVIPTT
PCSHSDGKVLSPSKEAKPNCYVRSSATPGVPLYPLQLDVIRHLVKISPVRAVLACVFGGS
ILYNGSDSIVSSSLNDEFTSSPDADRLFYEFSLDQSERYPTLNRWIQMQTNLHRVSEFVV
TPKQKPDDTRIKPDERTGIKRLLEHDSDSESDTEEIFSKNNIQPALTDGSRDGGSFETEV
CKTDPTVFLSFDWENEVPYEKAVNRLIDEGKLMDALALSDRFLRNGASDWLLQLLIKSRE
ENPSTSGRSQGYGGQSNSWQYCLRLKDKQLAATLALKYMHTWELEAALNVLTMCSCHLLE
SDPISLEVLHRRQALQKYSHILSADDRHNSWQEVEAECKEDPEGLALRLAGKGAVSAALE
VAESAGLSIDLRRELQGRQLVKLLTTDPLNGGGPAEASRFLSSLQDSADALPVVMGAMQL
LPDLRSKQLLVHFFLKRRDSNLSDLEVARLNSWALGLKVLAALPLPWQQRCSSLHEHPNL
ILEALLMRKQLQYASLILKEFPALGDNNVIMAYAAKAISVTISPPPREPRITVSASRLRQ
KSRAGPAVKASFTSSLSNFQREARRAFSWTPRNAENRTTSKDVYRKRKNSGLGASERAAW
EAMTGIPEDQGSSYSADGQDRLPSVSIAEEWMLTGDTTKDEAVRASHKYESTPDIILFKA
LLSLCSDELVSARSAMDLCISQMKNVLSSKQLSVGASVETIGRAYHATEAFVQGLSYAKS
LLRKLLGATESTNNNGERSKDVDDISSDAGSSSVGSQSMDEPSEVLSLAEIWLGRAELLQ
SLLGSGISASLDDIADQLSSECLRDRLISDERYSMAVYMCKKCKIDVFPVWKAWGLALLR
MERHAQARVKFKQAFQLKGEDIPDVIQEIINTIEGGPPVDVSIVRSMYDHLAKSAPTILD
DSLSADSYLNVLHMPSTFPRSERSRRSLESEKNNSVPGSDFEDGPRSNLDTTRYSECTNY
LQEHARQNLLGFMFRHGHYKDACMLFFPQSALPPPLQTSSVGAVSTSSSPQRTDPLATEY
GTIESLCEFCVGYGAISSLEEVITERLESAKHQDQAINQYIAGALTRICSYFEINRHFNY
LYNFLVLKKDYVTSGYCCIQLFMNSTTQEDAVKHLEHAKAHFEEALTARHRGSDSKKIVT
KGVRGKSAAEKLSEETLVTLSSRVKMQIDVVKSFSDSEGPPWKHSLFGNPNDIETSRRRC
EIVETLVEKNFDLAYSVIYEFKLSAVDIYAGVATSLANRKKGSQLTELFKNIKGTIQDDD
WDQVLGAAISVYANKHKERPDRLIDMLTSSHRKVLACVVCGRLKSAFQIASKSGSVADVQ
YVAHQALHANSHTVLDMCKQWLAQYM
NT seq
7461 nt
NT seq
+upstream
nt +downstream
nt
atggattcagaaacggagattctctcccgtctcgcggcgaaccacctccatttggctcaa
ttcgagccattgaaggctacgttactcgctctcagggttcgtaaccctgacctcgcactc
acgattctccaaaccatcgtctctaacgctggaagattcgataatgtcctttggtcacgc
tcttgtccttcaccgtctcttctctcgttcctctccacgattgaacttctgagattcgaa
aatcctacttctccttggggatttgattcggagactcttagtttgcgagcggatttcttg
ttgatggttcaggttttgatcgatagggttacagagaggattaaggaagatcaggagagt
gaggatgaaaatggtggattagggaattgtttaagggttttgcaaggtgttttggagtta
ggtgttgagaggttgaaatttgatgttgatactagtagtagtgaaggaagtaataagatt
gaggaagatgctgttgtttctttgaggagtatagtattagactactccgatgttttcgat
gctttatgttgtaatatacagaggcaacttgcgcgttgcgagagttacgatacatgtttg
gtggaggaagttcagggagaagaacagggaaaggggataaatgaggctacatgcattggt
tctccggagttggataacatcaacgtgtttgctttgatacagagaaatgttcagttagca
cagttggatgctatgaagacaaagttggatgaaggggatgtgcgtggagcagctgatcgc
atacgttatctccaccttgattatggagtagagaaagagaattatcatgctgttctaaaa
gctctcctttcacgaggtatggagaaaaaggatgaatatggtgactcctggcacatggtg
cgccagaacttgctgtttatttataaagaagctctctcatcgaattgcggagatcttgtt
cagatgatccagggtattcaagatgatattctcctcccagagagccagctacatttatct
ctcgacaatgaacaaattccactccctcttgagtatttccagcgatatcttgtagacttg
aaaactgagagaaatatagaggacaaaagttcccctatgaggagggcgattaattcttgt
ctcagagatatgtatcattatgctcgtatttctggatcacatgtccttgagtgtgtgatg
tgtgctgctttgtcgtctgtaaagaaagagaagattcaggaggctaatgatgttcttaca
ttgtttccccgacttcgcccattagtagcctccatgggttgggatctgttgccgggcaaa
actgcaacacgtagaaaattgatgcggctactttcgactagtgactcgcaagcaattcgg
ttagaagaatcttctctttatggaaaccagacagatgaaaaatcttgtgtcgaacacctc
tgcgatacattatgctatcagctggaacttgcatctttcgctgcttgtgtcaattctggt
aaatcatggactccaaaggcatctttcttgatgtacggtaatgtgtcacccgcgaatgat
gatgcggaggtggatccttttgttgaaaatcttgtattggaaaggctttcagcgcaaagt
ccacttcgggtattgtttgatgttgttccgggcataaaattccaagaagctatttcactg
attagtatgcaacctattgcttcaactgcagaagcttggaagagaatagaagatattgaa
ctgatgcatatgcgttatgctctggaggcaatcgttttagcactaggtgcattggaagag
gctatgaaagataatacggatgctagtcatcaagtagttttttaccatttaaaagacctc
actaaccatttggaggccatcaaaaatgttccacgcaagataatgatggtgaacatagtt
atttcactcttacatattgatgatatccatctcagttcaacgcaaagtgcctcctcggag
tgtttttctgaaaaaagtaacacacctggtttggatcttggcgatcttgatacaaaaggg
gaaaaggaaattgttatttctttcacaaaacagctactcgatgttttacgccgcaatctt
ccatcacatctgattgaacaagagtgtcagctggatggtaattacagtactgatggaaga
caggctttagaatggagagtatctctggctaagcgtttcattgatgattgtgaatggcga
ttatctgttatgcagcatcttctgccactttctgaacgccagtggggtttaaaggatgtt
ttgagtgttctaagggcggcccctgaaaaactgcttaatctctgtatgcagagagctaag
tatgacattggagaacaggcagttcatcggtttgcattatcagcagaggataaagccact
cttgaattagctgaatgggttgataatgcattcaaaggaacactggtagaagatgtgatg
tctcgtactgctgaaggagcatctgccgtgcaagatttagattttcattctttaggttcc
caattgagtccattggctatgattctactatgcatagatgcggctgcttcttctgccaag
tctccaacaatttccaaacaactgttggataagtctcaagttatgttatcagaaatttac
cctggaggatctccaaaggtggggtttacttactgggatcaggtccacgaagttgcaata
atctctgtattgcgaaggatcctaaagcgcctgcaggaattccttgaacaggataaccct
caaattcttcaagccagttttagtggagataccataatttcatcttgtatggaatctcat
agacagggacaaaacgatcgtgctcttgcgatgctacatcaaatgattgaggatgctcat
aggggcaagcgacagttcctcagtggtaagcttcataacctagcgagagcactcgctgat
gaaaaaccagaagttgacgtactcaaaggggatggatcagacatggccattgagaaggat
ggagttcttggtcttgggctaaaatatacaaagcaaagtcctggttcagcaaatagagac
gtggatggaaatcctgcttcccatgaaacagaagacaagggaaagaagacattgggccca
ttaagcaacaaaacctctacttatctatctcagtttatcctctacattgctgctattggt
gacatagtagatggaactgatacaacccatgatttcaactttttctctcttgtttatgaa
tggcctaaagacctattgacgcgtctggtttttgatcgaagtagcactgatgcagctgca
aaagttgctgaggtcatgtctgcggattttgttcatgaagtgatatcagcatgtgttccc
ccagtttatcctccacgttctggtcatgggtgggcttgtattcccgtcattccaaccact
ccatgttcccactcagatggtaaagtgctctctccttcaaaagaggctaaacctaactgt
tatgtccgttcctcagcaacacctggtgtccctctgtatcctcttcagttggatgttatc
aggcatttggtaaaaatatccccagtacgagcagttttagcttgcgtctttggtgggagc
atattgtacaatggcagtgattctatcgtatctagctccttgaacgatgagtttacaagt
tctcctgatgcagacagattgttttatgaattttctcttgatcagtctgagaggtatccc
actttaaaccgatggatacagatgcaaactaatcttcatcgagtttcggaatttgttgtg
acccctaagcaaaaacctgatgacacacggattaagcctgatgaaagaactgggataaag
agacttcttgaacatgatagtgactcagagtcggatacagaagaaattttttctaaaaat
aacattcaaccagcattgacagacggcagtcgtgatggtggatcctttgaaactgaagtt
tgtaaaactgatcctaccgtttttctttcttttgattgggagaatgaagtaccgtatgag
aaagctgtaaatagattaattgatgaaggaaaactaatggatgctttagcactttcggac
cgcttcttgcggaatggggcatctgattggttacttcagctcctaatcaaaagtagagaa
gaaaatccctcaacatcaggacgatctcagggatatggaggccagagcaacagttggcag
tattgcctgcggctaaaggacaaacagctggcagcaacactggctcttaagtatatgcat
acgtgggagcttgaggcagctttaaatgttcttacaatgtgtagttgtcatctcttagaa
agcgatccaattagtcttgaggtgttgcataggagacaagctctgcagaagtacagccac
atactttctgcagatgatcgccataatagctggcaagaggtagaagccgaatgtaaagaa
gaccctgaaggcttggctctaagattggctgggaaaggagctgtgtccgctgcgctagaa
gtggctgaaagtgcaggattatcaatagatcttagaagagaattacaaggacggcagctt
gtaaagcttctaaccactgatccactcaatggtggtggtcctgccgaagcatctcgattt
ttatcttcacttcaagactcggctgatgctctaccagtggttatgggtgcaatgcagtta
ttacctgaccttcgatcaaaacagcttctggtccatttctttctcaagcgaagagatagc
aatctgtcggatttggaagtcgcccggcttaattcctgggctttaggtctgaaagtgtta
gctgcattaccacttccttggcaacagagatgctcttcgcttcatgagcatcccaattta
atacttgaagctctgctaatgagaaaacaattacaatacgcctcactgatactcaaagag
ttcccagcattaggagataacaatgttatcatggcctatgcagcaaaagctatttctgtt
acaattagcccaccaccaagagaacctcgaataactgtgtctgcatcaaggttaagacag
aagtctagagcagggccagcagtaaaagcatccttcactagtagcttaagcaattttcag
agagaggctcgaagggcattttcatggactccacgtaatgctgaaaaccggacaacgtca
aaggatgtttatcgtaaaagaaagaattccggactgggggcttctgagagagctgcatgg
gaggcgatgacaggtattccagaggaccagggatcatcttattcggcagatggacaagat
aggctaccttctgtttctattgctgaagaatggatgctaactggcgacacaaccaaagat
gaagctgttcgtgcatctcacaaatatgaaagcaccccagatattattctcttcaaggct
ctactatcactttgttcagatgagctagtatcagcaagaagtgccatggacctatgcatc
agtcaaatgaaaaacgtattgagctccaaacagttgtcagtgggtgcgtctgttgaaaca
attggccgagcatatcatgcgacagaggcatttgtgcagggtttgtcatatgcaaaatcg
ttgctgagaaagcttctaggtgccactgaatcgaccaataacaatggtgaaagaagtaaa
gatgttgatgatatatcttctgatgctggcagctccagtgttggcagtcagtcaatggat
gaaccatccgaagttctctcacttgcagaaatctggttggggcgcgcagagttgctgcag
agcctcttagggtctggaatttctgcttctcttgatgacattgctgatcaattgtcatcc
gaatgtctacgagacagattaatatctgatgaacgatatagtatggcggtgtatatgtgc
aaaaaatgcaagattgatgttttccccgtatggaaagcatggggtcttgctttgttacgg
atggagcgccatgctcaagctcgagtcaaattcaagcaagcctttcaattaaaaggggaa
gacattcctgatgtcattcaggagataatcaatacaatagaaggaggtccgcctgtggat
gtgtcaattgttcgttccatgtatgaccatttggcgaaaagcgcaccaacaattttggac
gattctttatcagcagactcatacctgaatgttctgcatatgccatccactttccctcgt
tcagagaggtcgaggagatctctggaatcagaaaagaataattctgtacctggttcagac
tttgaagatggcccccgaagcaacttggatactacacgctattctgagtgcaccaactac
ttgcaggaacatgctcgccaaaacctgcttgggtttatgttccgccatggtcactataaa
gatgcatgcatgttattctttccgcaaagtgctcttccccctcctttgcaaacttcgtct
gtgggcgcagtaagcacatcttcatcacctcaacgaactgatcccttggcaactgaatat
gggactattgaaagtttgtgcgagttttgtgtcggttatggagctatctcatcccttgag
gaagtaattacagaaagacttgaatccgcaaagcatcaagatcaagccataaatcagtac
atagctggagctcttactcgtatctgttcatactttgagatcaaccggcatttcaattat
ctatacaattttctggtactcaagaaggattatgtcacctctgggtattgctgtattcag
ctttttatgaattctacaactcaggaggatgctgtaaagcatcttgagcatgcaaaggcg
cactttgaagaagcattgacggcgcgtcatagaggttcagactcgaaaaaaattgttaca
aagggtgttagaggaaaaagtgccgcggagaagctgagtgaagaaactcttgttacgttg
tcctcacgggtgaaaatgcagattgatgtggtgaagtccttcagtgactctgaaggacca
ccatggaagcattccttgtttggaaatccaaatgatatagagacatccaggagaagatgt
gaaatagtggagactcttgttgagaaaaatttcgacttagcttattcagttatatatgaa
ttcaagctctcagctgttgatatatatgctggtgttgctacgtcactagccaataggaag
aagggcagtcagttgacagaacttttcaaaaacattaaaggaacaatccaggatgatgac
tgggatcaggtcctgggtgctgccatcagtgtatatgccaacaagcacaaagagcgccct
gaccgtctcattgacatgttaacaagcagccatcgaaaggtgctggcttgtgtggtatgt
ggccgcctgaaaagtgcattccagattgcatctaaaagcggaagcgtggctgatgttcaa
tatgtagctcatcaagccttacatgccaattcgcacacagtactcgatatgtgcaagcaa
tggctagctcaatacatgtaa
DBGET
integrated database retrieval system
