Arabidopsis lyrata (lyrate rockcress): 9317080
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Entry
9317080 CDS
T01578
Name
(RefSeq) U-box domain-containing protein 12 isoform X1
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
9317080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9317080
Enzymes [BR:
aly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
9317080
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
U-box type E3
9317080
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
zf-RING_UBOX
MLKL_N
Neurochondrin
KAP
zf-Nse
zf-C3HC4_4
MCAfunc
zf-C3HC4_2
zf-C3HC4
HTH_Tnp_IS1
TPD52
Motif
Other DBs
NCBI-GeneID:
9317080
NCBI-ProteinID:
XP_002881013
UniProt:
D7LK90
LinkDB
All DBs
Position
Unknown
AA seq
652 aa
AA seq
DB search
MAKSEKHKLAQTLIDSINEIASISDHHTPMKKHCGNLSRRLKLLIPMLEEIRDNQESSSE
VVKALLSLKESLVPAKDLLSFVSQVSKIYLVLERDQVMVKFQKVTALLEQALSGIPYENL
EISDELKEQVELVLVQLRRAIGKGGDVYDDELYRDLLSLYSDIGSVTESDMLRSVAEKLQ
LMTITDLTQESLALLDMVSSSGGDPGESFEKMSMVLKKIKDFVQTDNPNLDDAPMRLKSR
LPKLQDGDQDRPVPPEDFRCPISLELMTDPVIVSSGQTYERECIKKWLEGGHLTCPKTQE
TLTSDTVTPNYVLRSLIAQWCESNGIEPPKRPNNSQPSSKASSSSSTPDDEHNKIEELLL
KLTSQHPEDQRSAAGEIRLLAKQNNHNRVAIAASGAIPLLVNLLTISNDYRTQEHAVTSI
LNLSICQENKGRIVYSCGAVPGIVHVLQRGSMEARENAAATLFSLSVIDENKVTIGAAGA
IPPLVTLLSEGSQRGKKDAATALFNLCIFQGNKGKAVRAGLVPVLMRLLTEPESGMVDEA
LAILAILSSHPDGKSVVAAADPVPVMVDFIRNGSPRNKENAAAVLVHLCSWNQQHLIEAQ
KLGIMSLLIEMAENGTDRGKRKAAQLLNRFSHFNDQQKQQSGLGVEDQISLI
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaatcagagaaacacaagttagcgcaaaccttaatcgattcaataaacgagatc
gcttcaatttccgatcaccacacaccgatgaagaagcactgcggaaacctctctcggcga
ttgaagcttcttattcctatgttggaagagatcagagacaatcaagaatcgtcgtcggaa
gttgtgaaggctttgttatctcttaaggagtcgcttgttcctgctaaggatttgctttct
ttcgttagccaagttagcaaaatttatctggtgttggagagagaccaagtgatggttaaa
tttcagaaagtgacggctctattggaacaagctttaagtggaatcccttatgagaatctt
gaaatttcagatgaacttaaagaacaggttgagcttgttttagttcagttaagaagagcg
ataggaaaaggcggcgatgtatatgatgatgagttatacagggatcttttatctctttac
agtgacataggcagtgtaacggagtctgacatgcttaggagtgtggcggagaagcttcag
ttgatgactataactgaccttacgcaagagtcattagctttacttgatatggttagttct
agtggtggagatcctggtgaaagttttgagaagatgtctatggttctcaagaagattaag
gactttgtgcaaactgataatcctaacttggatgatgctccgatgagactgaaatcaagg
cttccgaagttacaagatggagatcaggataggccagtgccgcctgaagatttccgttgt
ccaatttctctagaattgatgacggatccagttattgtttcttcagggcagacatatgaa
cgtgagtgcattaagaagtggcttgaaggaggacacttgacgtgtccaaagacgcaagaa
acgctgacaagtgataccgtcacaccaaactatgttctaagaagccttatagctcaatgg
tgtgagtctaatggcatcgaacctccaaagcgtcccaacaattctcaaccgagtagtaaa
gcctcatcttcctcctcaacccctgatgatgaacataacaagattgaagaactcctactt
aagctcacatcgcaacaccctgaagaccaaagatccgctgcaggagaaatccgtcttcta
gcaaaacaaaacaaccataaccgagtcgccattgctgcatcaggcgcgatccctcttctg
gtgaatctcctcacgatatccaatgactacagaactcaagaacacgctgtgacatcgatt
cttaatctctcgatatgccaagagaacaaaggaaggattgtttattcatgtggagcggtt
ccaggtattgttcatgtgctccagagaggcagcatggaagctagagaaaacgcagcagct
acacttttcagcctctcggttatagacgagaacaaagtgacaataggtgccgcaggagcg
atcccgcctcttgtgaccttgctgagcgaaggatcacaaagaggcaaaaaagacgcggcg
actgctctgttcaatctctgcatatttcaagggaacaaaggaaaagctgtgagagccggt
ttagtgcccgtgctaatgaggttactaacagaacccgaaagtggaatggttgatgaagca
ctcgctatattagccatactatccagtcacccggacgggaaatcagtggttgctgccgct
gatccagttccggttatggtagattttatcagaaacgggtcaccgcgaaacaaagaaaac
gcagctgcagtattagtgcacttgtgttcatggaatcagcagcatttgattgaagctcag
aaattagggattatgagtcttttaatagaaatggctgagaatggtactgacagaggaaaa
cgcaaagcggcacagttacttaaccggtttagccattttaacgaccagcagaaacaacag
tccggtttaggtgtggaagatcaaatctctctaatctga
DBGET
integrated database retrieval system
