Arabidopsis lyrata (lyrate rockcress): 9317170
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Entry
9317170 CDS
T01578
Name
(RefSeq) uncharacterized protein LOC9317170
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
9317170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aly03400
]
9317170
DNA repair and recombination proteins [BR:
aly03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
9317170
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GIY-YIG
Motif
Other DBs
NCBI-GeneID:
9317170
NCBI-ProteinID:
XP_020885697
LinkDB
All DBs
Position
Unknown
AA seq
378 aa
AA seq
DB search
MREKRGNRKALDPVGEDEVTGKEGKGFFACYLLTSLSPRHKGQTYIGFTVNPRRRIRQHN
GEITSGAWRTKKKRPWEMVLCIYGFPTNVSALQFEWAWQHPRESVAVREAAAAFKSFSGI
ASKIKLVYTMLNLPAWNSLNLTVNYFSSKYAHHGGKSPSLPLHMKVQVCALDDLQYFTKL
YNGSQPEDEESPKDNEENEEEEEEDSSNQSQPGNADTCSTDDLYPGEKELHGRHFENAKV
PVTVFDEEDRLANFTGFGLLEEETFEDEVSHITVGSIEATEKEPETVFNDRLASFTGFGL
VEIVEDEVSNGTVGSTEAMEKDCRRRRNLITSTTTEVDVEVIDLMTPSPSCRDGSSMKRR
RVSEFIDLTMSPNFIELL
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgagagagaaaaggggaaatcggaaagccctagatcccgtcggtgaggatgaagtcacc
ggaaaagagggaaaaggcttcttcgcttgttatctcttgacctctcttagccctcgtcat
aagggtcaaacctatatcgggttcacggtaaacccgaggaggagaataaggcagcacaat
ggagagatcactagtggtgcttggagaacaaagaaaaaacgtccatgggaaatggttctc
tgtatctatggtttccccaccaatgtctctgcccttcagtttgaatgggcttggcagcat
ccgagggaatcggttgcagtgagagaagctgctgctgctttcaaatccttctctgggatt
gcaagcaagatcaagcttgtatacacaatgttaaatcttccagcttggaatagtttaaac
ctcacagtcaattatttctcgtcaaagtatgcacaccacggcggtaaatctccaagttta
cctctacacatgaaagtccaagtttgtgctttggatgatcttcagtatttcacaaagcta
tacaatggttctcaacccgaagatgaagagagtcccaaggataatgaagagaatgaggag
gaggaggaggaggatagtagcaaccaaagccagcctgggaatgcagatacatgctcaacg
gatgacttgtatccaggtgaaaaagaacttcatggccggcattttgaaaatgcgaaagta
cctgtaactgtatttgatgaagaagacagattagcaaatttcactggttttggcttatta
gaagaagagacttttgaagatgaagtatcacatatcactgtaggatccattgaagctacg
gagaaagaacccgagactgtattcaacgacagattagcaagtttcactggttttggcttg
gtagagattgttgaagatgaagtatcaaatggaactgtaggatccactgaagctatggag
aaagattgtaggagaagaaggaaccttatcacctcaacgacgactgaggttgatgttgag
gtgatagatctgatgactccatcaccaagctgcagagatgggtcatctatgaagagacga
agagtttctgagtttatagatttgactatgtctcctaatttcatagagttgttgtaa
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integrated database retrieval system
