KEGG   Arabidopsis lyrata (lyrate rockcress): 9317386
Entry
9317386           CDS       T01578                                 
Name
(RefSeq) RING-H2 finger protein ATL39
  KO
K19038  E3 ubiquitin-protein ligase ATL41 [EC:2.3.2.27]
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:aly00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:aly04121]
    9317386
Enzymes [BR:aly01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     9317386
Ubiquitin system [BR:aly04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   ATL proteins
    9317386
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zf-rbx1 zf-RING_11 zf-C3HC4 zf-RING_UBOX zf-ANAPC11 zf-C3HC4_3 zf-Nse zf-RING_5 Zn_ribbon_IFT122_C zf-C2H2_Adnp2 zf-RING_16 Opalin Prok-RING_4 zf-C3HC4_4 TMEM129_C T3SS_NleG Hum_adeno_E3A TM_ErbB1
Other DBs
NCBI-GeneID: 9317386
NCBI-ProteinID: XP_002879476
UniProt: D7LGG4
LinkDB
Position
Unknown
AA seq 142 aa
MGFNDPSLNSIILWFASVTSLVTISVIFALLIICLLKRRRFDVSPETENEHRGRREPPCQ
GLSASVIAAFPTFSYKPDNNDPESNNQEIECPVCLGLIPKNVVIKVLPNCMHMFDEECIG
KWLESHATCPVCRRLVEPMAKQ
NT seq 429 nt   +upstreamnt  +downstreamnt
atgggtttcaatgatccttcattaaactcaatcatcctttggttcgcctccgtaacgtct
ctggtgactatctcagtcatcttcgcccttctcattatttgtttactcaaacgccgtagg
tttgatgtatcaccagaaaccgagaatgagcaccgcggaagaagagagccaccgtgccaa
gggcttagcgcttccgtgattgccgcctttcccactttttcttacaaaccggataataac
gatcccgagagcaacaatcaggagatcgagtgtccggtttgcttagggttaatccccaag
aatgttgtaattaaggttttaccaaattgtatgcacatgtttgatgaggaatgtatcggt
aagtggcttgaatcacacgcaacttgtcctgtgtgtcgtagacttgttgagccgatggct
aagcaatga

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