KEGG   Arabidopsis lyrata (lyrate rockcress): 9317400
Entry
9317400           CDS       T01578                                 
Name
(RefSeq) RRP12-like protein
  KO
K14794  ribosomal RNA-processing protein 12
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:aly00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:aly03009]
    9317400
Ribosome biogenesis [BR:aly03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    9317400
  Pre-60S particles
   Other pre-60S particles
    9317400
SSDB
Motif
Pfam: RRP12_HEAT TPR_TTI1_N
Other DBs
NCBI-GeneID: 9317400
NCBI-ProteinID: XP_020883958
LinkDB
Position
Unknown
AA seq 1279 aa
MESLCVGIDTSMCLSPSETDLPVSEDFGEYMRSRLSQSKRQDHEYLCAVIDELSKTLAED
NHPRTPVAYFAKTCISLDSLLSEDGEPRLDVVQPHVVILSLVFPKVSAGVLNRDGLALRL
VLSVLRLKSATPECLISGLKCLVHLLTTVESIMGNEGSDSYSILLNFVTHSDGKVRKLAS
LCLRDVLLKSHGTKPWQSVSGAIAELFQNYLELAHKSEVGSTEGARGAKQVLYILSTLKE
CLALMSRKHIATLIEGFKMLMILRDPYITRPVIDSLYAVCLNPTSEVPVEALLEVLSLAA
GLFSGHETSADAMTFTARLLKVGMTRSFSLNRDLCVVKLPSVFNGLNDIVASEHEEAIFA
ATDALKSLIFSCIDESLIREGVNGIRNSSLNVRKSSPTVIEKLCATVESLLDYKYHAVWD
MAFQVVSAMFDKLGEESAYFMRKTLEGLSDMQDLPDEGFPYRKQLHECVGSAVGAMGPET
FLSVVRLNLEASDLSEVKVWLFPILKQYTVGGRLSFFTETIFSMVETMSQKAQQLKLQGL
PVASRSVDSLVYSLWALLPSFCNYPVDTVESFADLGRILCGVLQTQAETRGIICASLNIL
IQQNKDVVEGKVPTNDASPAIQRATARYDSQHAAANLKVLRLCAPKLLDVLTRIFHESGK
DDGGSLQSAIGNLASIAEKKTVSKLLFKTLRELLEATKTAIAQDESSVSGMDVDNTADKN
SSSNLRARLFDLLVSLLPGLDGQEVDTIFSSLKPAMQDPKGLIQKKAYKVLSIILKSSDG
FVSKNLEELLELMHNICHVSAKRHKLDCLYFLLAHASRTDDLKERKDIVSSFLPEVILAL
KEVNKKTRNRAYDVLVQIGHAYADEENGGDNEKLHGYFNMVVGCLAGEKPQMISAAVKGV
ARLTYEFSDLIASAYNLLPSTFLLLQRKNKEITKANLGLLKVLVAKSPVEGLHANLKSMV
EGLLKWPEGTKNLFKAKVRLLLEMLIKKCGTEAVKSVMPEEHMKLLTNIRKVKERKEKKY
AAGSDISKSQHSIDASSKASRWNDTKIFSDFEDEYEDSDGEDMDAESHGRSKASSLLKSK
ASALRSKKSRNQSHLEVDESDDEPLDLMDRYKTRLALRSSELRKRKADSDEEAEFDVEGR
LIIREGERAKRKEISDADLDAKSSKGSRFSGNSSRKNQKRMKTSESGYSYTGKEYASKKA
SGDLKKKDKLEPYAYWPLDRKMMSRRPEQRAVAVRGMSSVVKMAKKMEGKSAAEALATTK
FKKFKRSGQKKSAGKKKNK
NT seq 3840 nt   +upstreamnt  +downstreamnt
atggaatcattatgtgttggcattgacaccagcatgtgcctctcaccctcagaaacggac
ctgcctgtttctgaagattttggggagtacatgcgctcacgcttatcacagtccaaaaga
caggaccatgaatatctatgcgctgtcattgatgagttatcaaaaactctagcagaagat
aatcatcctcggacacctgtggcttactttgccaagacatgcatctcgctagacagcctc
ttgtcggaagatggtgaaccacgtttggatgttgtccagccacatgttgtcatcctttcc
cttgtgttccctaaagtctcagcaggagtactgaatagggatgggttggctttgcgtctc
gtccttagtgttctgcgtctgaaatcagccacgcctgagtgcttgatttcgggattgaag
tgtttggttcaccttctcacaactgttgagtccattatggggaacgaaggctctgattcc
tacagcattttactgaattttgtaactcattcagacggaaaggtaagaaagctagcaagc
ttgtgtctccgtgatgtcctgctgaaatcccatggaacaaagccctggcaatcagtcagt
ggagctattgcagaattgttccagaattatttagaactcgcccataaatcggaagtgggt
tctaccgaaggagccaggggagcaaagcaagtgctttacattctcagcactctgaaagag
tgcttggccttgatgtcgagaaagcacattgctactttgattgagggatttaagatgctg
atgattcttcgcgatccatacattacaaggccagtgatagactctttatatgcagtttgt
ctcaatccaacctccgaggttccagttgaggcgctgctcgaagtgttatctcttgcggct
ggactgttctcaggacatgaaacatctgctgatgccatgacctttacagcacgtttactg
aaagttgggatgactaggagtttttccctgaatagagatctttgtgtggttaaacttcct
agtgtgttcaatggtctgaatgatattgttgcatctgaacacgaggaggcaatctttgca
gcaactgatgcgttgaagagtttaatattttcatgcattgacgaaagcttgatcagagaa
ggtgtcaacggaatccggaattcaagcttgaatgtacggaagtctagtccaacagtcatt
gaaaagctgtgtgcaacggttgagagcttgcttgattacaagtaccatgcagtctgggat
atggcttttcaagtagtttcagcgatgtttgataaattaggtgaagagtctgcatatttt
atgaggaagaccctcgagggcttatcagatatgcaagatttacctgatgaaggatttcct
taccggaagcagttgcatgagtgtgtaggatcagccgttggtgcaatgggacctgaaaca
tttttgagcgttgttcgtttaaaccttgaagctagtgatctgtctgaggtaaaagtttgg
ctcttcccaatcttgaagcagtatacagttggaggtcgcctaagtttcttcacagagact
atttttagtatggtcgaaacaatgagccagaaagctcaacagctcaagctacaaggtctt
cctgtagcatctaggagtgtggattctctcgtatattcattatgggctttgttaccttca
ttctgtaattatcccgtggatactgtggagagttttgccgatctggggcgaatattatgt
ggagttcttcaaacacaggctgagacccgtggaattatatgcgccagtttgaatattctt
attcaacaaaacaaggatgttgttgaggggaaagtacctactaatgatgctagtcctgct
attcaacgagctactgctcgttatgattcacagcatgctgcagctaatttgaaagttctg
cggttgtgtgctcctaaattattggatgttttgacaaggatatttcatgaatctggcaaa
gatgatggcggttctcttcagtctgcgataggcaacttggcttccatagcggagaaaaag
actgtttcaaagctacttttcaagactctgcgagagcttttagaggctaccaaaactgcc
attgcacaagatgaaagttctgttagtgggatggatgtggataataccgcagacaaaaat
tcatcttccaacttaagggcaaggttgtttgatctgttagtttcacttctaccgggtttg
gatggtcaagaagtagataccatattcagttctctgaagcctgcaatgcaggatcccaag
ggcctaattcaaaagaaagcgtacaaagttctttcgatcatcttgaagagttctgatgga
tttgtttcaaagaacctcgaggagttgcttgagctgatgcacaatatatgccatgtctct
gcgaaacgccataaacttgattgtttatacttcctgttagctcatgcgtcaaggactgat
gatttaaaggagagaaaagacattgtttcttcttttctacccgaagttatacttgcttta
aaggaggtaaataaaaaaacaagaaacagagcctatgacgtgcttgttcagattggtcat
gcatacgcagatgaggaaaatggtggagacaatgagaaattgcatgggtacttcaatatg
gtagttggttgcttggctggagaaaaacctcagatgattagtgctgctgtcaagggtgta
gctcgtttgacatatgagttctccgatctcatagctagtgcttacaatttgcttccttca
acatttcttctcctccaaaggaaaaataaagaaatcacaaaagcaaatttaggtttgttg
aaggtgttggtggctaaatcaccggttgaaggactacacgcaaacttaaagagcatggtt
gaaggcttactaaagtggccagaaggaacgaaaaaccttttcaaagcaaaggtgaggctt
ctgttggagatgctcatcaagaaatgtggcacggaggctgtcaagtctgtgatgcctgag
gaacatatgaaactcctgacaaacatccgaaaggtcaaggaacgtaaagagaaaaaatat
gcagctggctctgacatcagtaaatcgcagcattcaatagatgcttcatcaaaggctagc
aggtggaatgatacgaagatattttctgactttgaggatgaatacgaggacagtgacgga
gaggacatggatgcggagtcgcatggccgtagcaaggcttcgtctttgttaaaatccaag
gcatccgctttgagatccaagaaaagtcggaaccagagtcaccttgaagtggatgagtca
gatgatgaaccgcttgacttaatggatcggtacaaaacaagattagctcttcgatcaagt
gaacttcgcaaacggaaagctgactcggatgaagaagcagagtttgatgtggaagggcgg
ctaatcattcgtgaaggagagagggctaaaaggaaggaaatatctgatgcagatttagat
gccaaaagtagcaaaggtagccgtttctctggaaactcatctaggaagaaccaaaagcgg
atgaagacatcagagtctggatactcttacacaggcaaagagtatgcaagtaaaaaggca
agtggcgatctgaagaagaaagataaacttgaaccgtatgcatattggccacttgatcgc
aagatgatgagccgtagaccagagcagcgggcagttgcagtcagagggatgtcaagtgtg
gtcaagatggcaaagaagatggaaggaaagagcgctgcagaagcacttgccacgaccaag
ttcaaaaaattcaagaggagtggtcagaagaaatctgctgggaagaagaaaaacaagtaa

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