Arabidopsis lyrata (lyrate rockcress): 9317400
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Entry
9317400 CDS
T01578
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aly03009
]
9317400
Ribosome biogenesis [BR:
aly03009
]
Eukaryotic type
90S particles
Other 90S particles
9317400
Pre-60S particles
Other pre-60S particles
9317400
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
TPR_TTI1_N
Motif
Other DBs
NCBI-GeneID:
9317400
NCBI-ProteinID:
XP_020883958
LinkDB
All DBs
Position
Unknown
AA seq
1279 aa
AA seq
DB search
MESLCVGIDTSMCLSPSETDLPVSEDFGEYMRSRLSQSKRQDHEYLCAVIDELSKTLAED
NHPRTPVAYFAKTCISLDSLLSEDGEPRLDVVQPHVVILSLVFPKVSAGVLNRDGLALRL
VLSVLRLKSATPECLISGLKCLVHLLTTVESIMGNEGSDSYSILLNFVTHSDGKVRKLAS
LCLRDVLLKSHGTKPWQSVSGAIAELFQNYLELAHKSEVGSTEGARGAKQVLYILSTLKE
CLALMSRKHIATLIEGFKMLMILRDPYITRPVIDSLYAVCLNPTSEVPVEALLEVLSLAA
GLFSGHETSADAMTFTARLLKVGMTRSFSLNRDLCVVKLPSVFNGLNDIVASEHEEAIFA
ATDALKSLIFSCIDESLIREGVNGIRNSSLNVRKSSPTVIEKLCATVESLLDYKYHAVWD
MAFQVVSAMFDKLGEESAYFMRKTLEGLSDMQDLPDEGFPYRKQLHECVGSAVGAMGPET
FLSVVRLNLEASDLSEVKVWLFPILKQYTVGGRLSFFTETIFSMVETMSQKAQQLKLQGL
PVASRSVDSLVYSLWALLPSFCNYPVDTVESFADLGRILCGVLQTQAETRGIICASLNIL
IQQNKDVVEGKVPTNDASPAIQRATARYDSQHAAANLKVLRLCAPKLLDVLTRIFHESGK
DDGGSLQSAIGNLASIAEKKTVSKLLFKTLRELLEATKTAIAQDESSVSGMDVDNTADKN
SSSNLRARLFDLLVSLLPGLDGQEVDTIFSSLKPAMQDPKGLIQKKAYKVLSIILKSSDG
FVSKNLEELLELMHNICHVSAKRHKLDCLYFLLAHASRTDDLKERKDIVSSFLPEVILAL
KEVNKKTRNRAYDVLVQIGHAYADEENGGDNEKLHGYFNMVVGCLAGEKPQMISAAVKGV
ARLTYEFSDLIASAYNLLPSTFLLLQRKNKEITKANLGLLKVLVAKSPVEGLHANLKSMV
EGLLKWPEGTKNLFKAKVRLLLEMLIKKCGTEAVKSVMPEEHMKLLTNIRKVKERKEKKY
AAGSDISKSQHSIDASSKASRWNDTKIFSDFEDEYEDSDGEDMDAESHGRSKASSLLKSK
ASALRSKKSRNQSHLEVDESDDEPLDLMDRYKTRLALRSSELRKRKADSDEEAEFDVEGR
LIIREGERAKRKEISDADLDAKSSKGSRFSGNSSRKNQKRMKTSESGYSYTGKEYASKKA
SGDLKKKDKLEPYAYWPLDRKMMSRRPEQRAVAVRGMSSVVKMAKKMEGKSAAEALATTK
FKKFKRSGQKKSAGKKKNK
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atggaatcattatgtgttggcattgacaccagcatgtgcctctcaccctcagaaacggac
ctgcctgtttctgaagattttggggagtacatgcgctcacgcttatcacagtccaaaaga
caggaccatgaatatctatgcgctgtcattgatgagttatcaaaaactctagcagaagat
aatcatcctcggacacctgtggcttactttgccaagacatgcatctcgctagacagcctc
ttgtcggaagatggtgaaccacgtttggatgttgtccagccacatgttgtcatcctttcc
cttgtgttccctaaagtctcagcaggagtactgaatagggatgggttggctttgcgtctc
gtccttagtgttctgcgtctgaaatcagccacgcctgagtgcttgatttcgggattgaag
tgtttggttcaccttctcacaactgttgagtccattatggggaacgaaggctctgattcc
tacagcattttactgaattttgtaactcattcagacggaaaggtaagaaagctagcaagc
ttgtgtctccgtgatgtcctgctgaaatcccatggaacaaagccctggcaatcagtcagt
ggagctattgcagaattgttccagaattatttagaactcgcccataaatcggaagtgggt
tctaccgaaggagccaggggagcaaagcaagtgctttacattctcagcactctgaaagag
tgcttggccttgatgtcgagaaagcacattgctactttgattgagggatttaagatgctg
atgattcttcgcgatccatacattacaaggccagtgatagactctttatatgcagtttgt
ctcaatccaacctccgaggttccagttgaggcgctgctcgaagtgttatctcttgcggct
ggactgttctcaggacatgaaacatctgctgatgccatgacctttacagcacgtttactg
aaagttgggatgactaggagtttttccctgaatagagatctttgtgtggttaaacttcct
agtgtgttcaatggtctgaatgatattgttgcatctgaacacgaggaggcaatctttgca
gcaactgatgcgttgaagagtttaatattttcatgcattgacgaaagcttgatcagagaa
ggtgtcaacggaatccggaattcaagcttgaatgtacggaagtctagtccaacagtcatt
gaaaagctgtgtgcaacggttgagagcttgcttgattacaagtaccatgcagtctgggat
atggcttttcaagtagtttcagcgatgtttgataaattaggtgaagagtctgcatatttt
atgaggaagaccctcgagggcttatcagatatgcaagatttacctgatgaaggatttcct
taccggaagcagttgcatgagtgtgtaggatcagccgttggtgcaatgggacctgaaaca
tttttgagcgttgttcgtttaaaccttgaagctagtgatctgtctgaggtaaaagtttgg
ctcttcccaatcttgaagcagtatacagttggaggtcgcctaagtttcttcacagagact
atttttagtatggtcgaaacaatgagccagaaagctcaacagctcaagctacaaggtctt
cctgtagcatctaggagtgtggattctctcgtatattcattatgggctttgttaccttca
ttctgtaattatcccgtggatactgtggagagttttgccgatctggggcgaatattatgt
ggagttcttcaaacacaggctgagacccgtggaattatatgcgccagtttgaatattctt
attcaacaaaacaaggatgttgttgaggggaaagtacctactaatgatgctagtcctgct
attcaacgagctactgctcgttatgattcacagcatgctgcagctaatttgaaagttctg
cggttgtgtgctcctaaattattggatgttttgacaaggatatttcatgaatctggcaaa
gatgatggcggttctcttcagtctgcgataggcaacttggcttccatagcggagaaaaag
actgtttcaaagctacttttcaagactctgcgagagcttttagaggctaccaaaactgcc
attgcacaagatgaaagttctgttagtgggatggatgtggataataccgcagacaaaaat
tcatcttccaacttaagggcaaggttgtttgatctgttagtttcacttctaccgggtttg
gatggtcaagaagtagataccatattcagttctctgaagcctgcaatgcaggatcccaag
ggcctaattcaaaagaaagcgtacaaagttctttcgatcatcttgaagagttctgatgga
tttgtttcaaagaacctcgaggagttgcttgagctgatgcacaatatatgccatgtctct
gcgaaacgccataaacttgattgtttatacttcctgttagctcatgcgtcaaggactgat
gatttaaaggagagaaaagacattgtttcttcttttctacccgaagttatacttgcttta
aaggaggtaaataaaaaaacaagaaacagagcctatgacgtgcttgttcagattggtcat
gcatacgcagatgaggaaaatggtggagacaatgagaaattgcatgggtacttcaatatg
gtagttggttgcttggctggagaaaaacctcagatgattagtgctgctgtcaagggtgta
gctcgtttgacatatgagttctccgatctcatagctagtgcttacaatttgcttccttca
acatttcttctcctccaaaggaaaaataaagaaatcacaaaagcaaatttaggtttgttg
aaggtgttggtggctaaatcaccggttgaaggactacacgcaaacttaaagagcatggtt
gaaggcttactaaagtggccagaaggaacgaaaaaccttttcaaagcaaaggtgaggctt
ctgttggagatgctcatcaagaaatgtggcacggaggctgtcaagtctgtgatgcctgag
gaacatatgaaactcctgacaaacatccgaaaggtcaaggaacgtaaagagaaaaaatat
gcagctggctctgacatcagtaaatcgcagcattcaatagatgcttcatcaaaggctagc
aggtggaatgatacgaagatattttctgactttgaggatgaatacgaggacagtgacgga
gaggacatggatgcggagtcgcatggccgtagcaaggcttcgtctttgttaaaatccaag
gcatccgctttgagatccaagaaaagtcggaaccagagtcaccttgaagtggatgagtca
gatgatgaaccgcttgacttaatggatcggtacaaaacaagattagctcttcgatcaagt
gaacttcgcaaacggaaagctgactcggatgaagaagcagagtttgatgtggaagggcgg
ctaatcattcgtgaaggagagagggctaaaaggaaggaaatatctgatgcagatttagat
gccaaaagtagcaaaggtagccgtttctctggaaactcatctaggaagaaccaaaagcgg
atgaagacatcagagtctggatactcttacacaggcaaagagtatgcaagtaaaaaggca
agtggcgatctgaagaagaaagataaacttgaaccgtatgcatattggccacttgatcgc
aagatgatgagccgtagaccagagcagcgggcagttgcagtcagagggatgtcaagtgtg
gtcaagatggcaaagaagatggaaggaaagagcgctgcagaagcacttgccacgaccaag
ttcaaaaaattcaagaggagtggtcagaagaaatctgctgggaagaagaaaaacaagtaa
DBGET
integrated database retrieval system