Arabidopsis lyrata (lyrate rockcress): 9317853
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Entry
9317853 CDS
T01578
Name
(RefSeq) transcription initiation factor IIB-1
KO
K03124
transcription initiation factor TFIIB
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
9317853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aly03021
]
9317853
Transcription machinery [BR:
aly03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
9317853
Prokaryotic type
Archaeal type
TFB
9317853
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
HTH_5
Ribosomal_S27e
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
9317853
NCBI-ProteinID:
XP_002881787
UniProt:
D7LH90
LinkDB
All DBs
Position
Unknown
AA seq
312 aa
AA seq
DB search
MSDAYCTDCKKETELVVDHSAGDTLCSECGLVLESHSIDETSEWRTFANESSNSDPNRVG
GPTNPLLADSALTTVIAKPNGSSGDFLSSSLGRWQNRNSNSDRGLIQAFKTIATMSERLG
LVATIKDRANEIYKRLEDQKTTRGRNQDALYAACLYIACRQEDKPRTIKEICVIANGATK
KEIGRAKDYIVKTLGLDPGQSVELGTIHAGDFMRRFCSNLGMSNHAVKAAQEAVQKSEEF
DIRRSPISIAAVVIYIITQLSDDKKTLKDISTATGVAEGTIRNSYKDLYPHLAKIAPSWY
AKEEDLKNLSSP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatgcgtattgtactgattgtaaaaaggagacggagctggtggtcgatcactca
gccggagataccctttgctccgagtgtggtttggttttggaatctcactccattgatgag
acctctgagtggcgtaccttcgctaatgaatcatccaacagcgatcccaatcgtgtcggt
ggtccaaccaatccgcttctcgccgatagtgctctcaccactgtcatcgctaagcccaat
ggttcctccggtgatttcctgtcttcttctctcgggaggtggcagaatcgtaactccaat
tccgatcgtggtttgattcaagcgtttaaaaccattgctaccatgtctgaaaggttggga
cttgttgcgacaatcaaggatcgggctaatgagatatataagaggctggaggatcaaaag
acaaccaggggaagaaatcaggatgcactctatgcagcctgcctgtacattgcctgtcgc
caagaggacaagccacgaaccattaaggaaatatgcgttattgccaatggtgcgacaaag
aaggaaattggccgagcaaaagactacattgttaagacattgggactggatcctggtcag
tctgtggaactaggcacaatacacgctggtgatttcatgagaaggttctgctccaacctt
ggaatgtctaaccatgcggttaaagctgctcaggaagctgtgcaaaaatctgaggaattt
gatataaggaggagtcctatatcaatagcagcagtagttatctacatcataacccagctt
tctgatgacaagaagactctcaaagatatatcgacagcgacaggagtagcagaagggaca
ataagaaattcatacaaagacttgtacccacatctggcaaagatagcaccaagttggtat
gctaaggaagaggatcttaaaaacctgtcaagtccttga
DBGET
integrated database retrieval system
