Arabidopsis lyrata (lyrate rockcress): 9317870
Help
Entry
9317870 CDS
T01578
Name
(RefSeq) polygalacturonase ADPG2
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00040
Pentose and glucuronate interconversions
aly01100
Metabolic pathways
Module
aly_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
9317870
Enzymes [BR:
aly01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
9317870
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
9317870
NCBI-ProteinID:
XP_020884034
LinkDB
All DBs
Position
Unknown
AA seq
433 aa
AA seq
DB search
MARCSKLVTVFLLWALLMFSWCKGSRISPNGYDHSYKRFKSDSLINRKQDITGLRSFVRA
SLRTPTTVSVSDYGAKGDGKTDDTQAFVNAWKKACSSNGAVNLLVPKGNTYFLKSIQLTG
PCSSIITVQMFGTLSASQKRTDYKDISKWIMFDGVNSLSVDGGGTGVVDGNGETWWQNSC
KRNKAKPCTKAPTALTFYNSKSLIVENLRVRNAQQIQISIEKSSNVQVSNVVVTAPADSP
NTDGIHITNTQNIRVSDSIIGTGDDCISIESGSQNVQINDITCGPGHGISIGSLGDDNSK
AFVSGVTVDGAKLSGTDNGVRIKTYQGGSGTASNIIFQNIQMENVKNPIIIDQDYCDKSK
CTSQQSAVQVKNVVYRNISGTSASDKAITFNCSKNYPCLGIVLDKVNIKGGKATCTNANV
VDKGAVFPQCNST
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggcccgttgttccaaacttgttaccgttttcctattatgggctcttttgatgttctca
tggtgcaaaggttcaagaatcagccctaatggatatgatcattcttataaaaggttcaaa
tccgatagcttaatcaatcgaaaacaggacatcacgggcttgagaagttttgtaagagcc
tctttgcggactccaaccacagttagtgtttctgattatggagctaaaggagatggaaaa
accgatgacacgcaggcgttcgtgaatgcgtggaagaaagcatgttcttcaaatggagct
gttaatctcctagttcctaaagggaatacttatttccttaagtctattcaattaactggt
ccatgcagttctatcattaccgttcagatgttcggaacgttatccgcatctcaaaagcga
acggattacaaagatatcagcaaatggataatgtttgacggcgttaacagtctatcagtc
gatggcggcggcactggggttgtggacggaaacggcgaaacgtggtggcaaaactcatgc
aaacggaacaaagctaagccatgcacaaaagccccaacggctcttactttctacaactcg
aaaagtctgatagtggaaaatctgagggtgagaaatgcacagcagattcagatttcgatt
gaaaaatcctccaacgttcaggtctctaatgtcgtggtaactgcgcctgcggatagtcct
aacaccgatggtattcatatcactaacacccaaaacattcgagtctccgactccatcata
ggaacaggtgatgattgcatatctattgaaagtggatcacaaaatgttcaaatcaatgat
ataacttgcggtcctggtcacggtatcagtattgggagccttggagatgacaattcaaag
gcttttgtctcaggcgtgactgtggatggtgcaaagctttccggtacagacaatggagta
agaatcaaaacttaccagggagggtcaggaactgctagcaatattatatttcaaaacatt
cagatggaaaatgtgaagaatccgatcataattgaccaagactactgcgacaagagcaaa
tgcacttcacagcaatccgcggtccaagtgaagaacgtggtgtaccgaaacattagcggc
actagcgcgtcggacaaggcaataacgtttaactgcagcaagaactatccatgcctagga
attgtgcttgacaaagtgaacattaaaggagggaaagcaacttgcaccaatgccaatgtg
gttgataaaggagctgtattccctcaatgcaactccacttaa
DBGET
integrated database retrieval system
