Arabidopsis lyrata (lyrate rockcress): 9317904
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Entry
9317904 CDS
T01578
Name
(RefSeq) RING-H2 finger protein ATL40
KO
K19038
E3 ubiquitin-protein ligase ATL41 [EC:
2.3.2.27
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9317904
Enzymes [BR:
aly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
9317904
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
9317904
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-RING_5
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_4
Orf78
Prok-RING_1
Prok-RING_4
zf-RING_6
PHD
zf-RING-like
zf-C3HC4_4
zf-RING_10
DUF2417
PHD_NSD
RINGv
Motif
Other DBs
NCBI-GeneID:
9317904
NCBI-ProteinID:
XP_002879981
UniProt:
D7LI49
LinkDB
All DBs
Position
Unknown
AA seq
217 aa
AA seq
DB search
MSSDNKTNDDSDRSFWQSSTSYDASSKIMLVTTVSFSVIILIVFVYYLYAKFVLRRRRST
FQDLSFSVVSHPPKRGLDTLVIASLPTFVVGVKNEVAGTECAVCLSLLEEKDNARMLPNC
KHVFHVTCVDTWLTTQSTCPVCRTEAEPSPRLEPEPREGPVGDVAPPLDFVGVDNKTGGS
SVLRLDSFRRILTRERSLNRLDHSRVEQDRELDIERQ
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgacaacaaaacaaatgatgattccgaccgttcgttttggcaaagctcgact
tcttacgatgccagcagcaagatcatgctcgtcaccaccgtttccttctcagttattatc
ctcatcgtcttcgtttattatctctacgcaaaattcgttcttcgccgccgtagatccacc
ttccaagacctctcgttctccgtcgtttctcatccgcccaaacgtggcctcgacactcta
gtcatcgcttctctcccaacgttcgtggttggagtcaagaatgaagtggcgggtacggaa
tgtgcggtttgtctaagcttgttggaggagaaagataatgcgaggatgttaccgaactgc
aaacacgtgttccacgtgacttgcgttgacacgtggctcaccacgcagtccacttgtccc
gtttgtcgaactgaagccgagccaagtccaaggcttgagcctgagcctagggaagggcca
gttggcgacgttgcaccgccgttagatttcgtgggggtagataacaaaaccggtgggtca
tcggttttgaggttagactcgtttcgaaggattttgacaagggaaagatctttgaacagg
ctcgatcattctcgcgttgaacaagatcgagaattggatatagaaagacagtga
DBGET
integrated database retrieval system
