Arabidopsis lyrata (lyrate rockcress): 9318002 Help Entry 9318002           CDS       T01578                                  Name (RefSeq) polygalacturonase   KO K01184   polygalacturonase [EC:3.2.1.15] Organism aly  Arabidopsis lyrata (lyrate rockcress) Pathway aly00040   Pentose and glucuronate interconversions aly01100   Metabolic pathways Module aly_M00081   Pectin degradation Brite KEGG Orthology (KO) [BR:aly00001]  09100 Metabolism   09101 Carbohydrate metabolism    00040 Pentose and glucuronate interconversions     9318002 Enzymes [BR:aly01000]  3. Hydrolases   3.2  Glycosylases    3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds     3.2.1.15  endo-polygalacturonase      9318002 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Glyco_hydro_28 Pect-lyase_RHGA_epim Pectate_lyase_4 NosD LSM_int_assoc Motif Other DBs NCBI-GeneID:  9318002 NCBI-ProteinID:  XP_002880073 UniProt:  D7LKJ6 LinkDB All DBs Position Unknown AA seq 393 aa AA seqDB search MATNISFPCAIIFFFNVFFFINSSHAMPSFNVQRYGARGDGRTDATKSFLTAWSLACGSR ARAMVYVPRGTYLVKNLVFWGPCKNIITFKNDGTLVAPANYWDIGNSGYWILFAKVNRIS VYGGTIDARGAGYWSCRKKGSHCPQGARSISFSWCNNVLLSGLTSFNSQNMHVTVHHSSN VRIQNIRIRAPSGSPNTDGIHIQSSSGVTISGGTIATGDDCIALSQGSRNVWIERVNCGP GHGISIGSLGDYANEEGVQNVTVTSSVFTKTQNGVRIKTWARPSRGFVNNVVFRNLIMNN VGNPVIIDQNYCPNGNGCPRQSSGVKISGVTFANIKGTSTTPIAMKLDCSGSSHCTGLRL QDIKLTYMRRSSASYCRNAHGRASGVMVPRNCM NT seq 1182 nt NT seq  +upstreamnt  +downstreamnt atggctactaacatctcctttccttgtgccatcatatttttctttaatgttttcttcttt atcaactcatcacacgcaatgccatcgtttaacgtacaaagatacggagctagaggtgac ggaagaacagatgcgaccaagtcctttttgacagcttggtctttagcctgcggctcacgg gctcgagccatggtctacgttccccgtggaacatatttggtcaaaaacctagtcttttgg ggtccttgcaagaacattattactttcaaaaacgatggaacactcgtggctccagcgaac tactgggatataggtaattccggttactggattcttttcgctaaagtaaaccggatctcg gtttacggtggcaccattgatgctagaggagctggttattggtcttgtagaaagaaaggt agccattgtcctcaaggtgcaaggtctatatcgttcagctggtgcaataatgtgttacta agtggtctaacgtcgtttaatagccagaatatgcacgtcacggttcatcattcctctaat gttcggattcaaaacataagaattagggctccaagtggaagccctaacaccgatggtatc cacatacagtcttcttccggagtcaccattagtggtggaaccattgcgaccggtgatgac tgcattgctcttagtcaaggatctaggaacgtttggatcgaacgtgtgaattgtggaccg ggacatggaatcagcattgggagtcttggggattacgctaatgaggagggtgtgcagaat gtaaccgttacgagctctgttttcaccaagacgcagaacggagtaagaataaaaacttgg gctaggcctagcagagggtttgtgaataatgtggtatttcgaaatttgataatgaataat gtcggtaatccggtgataatcgatcaaaactactgtcctaatggaaatggctgtcctcgt cagagctctggcgtgaagataagtggagtgacttttgcaaacataaagggaacatcaaca acaccaatagctatgaaattggattgtagtggaagcagtcattgcacagggcttaggtta caagacattaagctcacatacatgagaagatcatcagcttcttactgtaggaacgcccat ggaagagcctctggagttatggttccaaggaattgtatgtga

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