KEGG   Arabidopsis lyrata (lyrate rockcress): 9318008
Entry
9318008           CDS       T01578                                 
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC9318008
  KO
K12825  splicing factor 3A subunit 1
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    9318008
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aly03041]
    9318008
Spliceosome [BR:aly03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    9318008
 Complex B
    9318008
 Complex C
   U2 SnRNP specific factors
    9318008
SSDB
Motif
Pfam: Surp
Other DBs
NCBI-GeneID: 9318008
NCBI-ProteinID: XP_020882652
LinkDB
Position
Unknown
AA seq 455 aa
MEKKMNETPPLPPDDDDDLRRIMLERLSITAARGGLEMEEKLKTIFFGLDIPSCSFVFPK
GRDHHLYKQKIAEYTKSPPLHSPPPPLPPGLVAQCDFKSSLTEQVALNHELFAFKVRVPE
GGMSPXRRHDRKELAIIKFTAQFVVRYGRYFWWALRDRVSTDTQFKFLDKGGPRYHFFSR
ICLQFGHLIRAWEDPPASMEALLEGFFTAFNAFKKKLEDDEELVDKVKTDRRDFVVCDEY
FVDPENKALELIPMAMRHPPLNEHHSQGTFRLPPDLILFRVRIPQGGMMRKELGITKFTA
LFVVRYGNEFWDAMWDRVSTDTQFTFLKKNHGNDRGRYTLLFSQFLLAYGNVIKPWGLMP
RKSNPPARMEAVLEGFFTAFNAFKKKQEDKEDEVVNKVVVVTDRRDFVVSEEYFQYFLDM
EESTPRPEMLLPRRQTGSLSTTTYTRGSRGKERKA
NT seq 1368 nt   +upstreamnt  +downstreamnt
atggagaaaaaaatgaatgaaactccaccactacctccagatgatgatgatgatctgaga
cgtatcatgttggagaggctttcaattaccgccgccagaggcgggttggagatggaggag
aagctgaagaccatattttttggccttgatattccatcatgcagctttgtgttccccaaa
ggtcgtgatcaccatctttacaagcagaaaattgctgaatacactaagtctcctcctctt
cattctcctcctcctcctctcccaccaggcctagttgctcaatgcgattttaagtctagc
ctcacggagcaagttgctcttaaccacgaactttttgcgtttaaagtccgagtccctgaa
ggaggcatgagtccctgaaggaggcatgatcgcaaggagcttgctattattaagttcaca
gcccagtttgtggtgcggtatgggcgttatttttggtgggctctgcgggatagagtgtct
actgatactcagttcaagtttctggataagggaggtccaaggtatcactttttctctcgt
atttgtcttcaatttggtcatctaataagggcttgggaagatcctccggctagtatggaa
gctcttcttgaaggttttttcactgcttttaatgctttcaagaaaaagctagaggatgat
gaggagctagtggacaaggttaagactgataggcgtgattttgtggtttgtgatgagtat
tttgttgaccccgagaacaaagcccttgaactcattccaatggccatgaggcatcctcct
ctgaatgaacaccattctcagggtacattcaggctgccgcctgaccttatcttgtttaga
gttaggatccctcaaggaggcatgatgcgcaaggagcttggtattaccaagttcacagcc
ctgtttgtggtgcggtatgggaatgagttttgggatgctatgtgggatagagtgtctact
gatactcagttcacgtttctgaaaaagaatcatggaaatgatagaggaaggtatacgctt
cttttctctcagtttctgcttgcgtatggtaatgtaataaagccttggggactgatgccg
agaaagagtaacccgccggctcgtatggaagctgttcttgaagggtttttcactgctttt
aatgctttcaagaaaaagcaagaggataaggaggacgaggtagtgaacaaggttgtggtt
gtgactgataggcgtgattttgtggttagtgaagagtattttcagtattttcttgacatg
gaggagtctactcctcgacctgaaatgcttcttccgcggcgccaaacgggatctctgtca
accaccacctatacacgaggaagcagaggcaaagagaggaaagcctga

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