Arabidopsis lyrata (lyrate rockcress): 9318125 Help Entry 9318125           CDS       T01578                                  Name (RefSeq) protein SUPPRESSOR OF PHYA-105 1   KO K16240   protein suppressor of PHYA-105 1 and protein SPA1-related 2 Organism aly  Arabidopsis lyrata (lyrate rockcress) Pathway aly04712   Circadian rhythm - plant Brite KEGG Orthology (KO) [BR:aly00001]  09150 Organismal Systems   09159 Environmental adaptation    04712 Circadian rhythm - plant     9318125  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:aly04121]     9318125 Ubiquitin system [BR:aly04121]  Ubiquitin ligases (E3)   Multi subunit type E3    Multi subunit type E3 associated proteins     9318125 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  WD40_CDC20-Fz WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EIPR1 Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_TEP1_C EIF3I Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_DCAF4 Pkinase Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_HPS5 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214 WD40_RFWD3 Beta-prop_DCAF12 WD40_like PK_Tyr_Ser-Thr PPV_E1_C AROS Motif Other DBs NCBI-GeneID:  9318125 NCBI-ProteinID:  XP_020883280 LinkDB All DBs Position Unknown AA seq 1030 aa AA seqDB search MWMPVMERVAEETVASNNNIQLKGRVDDVPCKLDALHSNMVIQSETRNSDCPGSSAHRTL EMTKPPPPEDSAGAKLSVEELTLGNYRIVQGTNNTNMDSSRAGKFEHLYRLARGSSLRPG DGDLDSQPRDMDQMLSRIRQQLAGAPSERQNLKPFMTRRSDHNLEAFSERLRAAGENSII KAPSLISSEGVQLNAPVNFSQLLLKRAMKGKGVVGKNQESPPEFFSDQDLGSKEKQLDSS KSPTPHHVLPLKSSPKGNGMVSHGDGNHTKSSFGISLREFLRSSYAKREKRHGLCLFRQL VELVDSAHSKGLFLLDLRPSLFTLVPSKKLRYIGTFGKNDLDSGVDEDLNRRRPVVQESS IGGRDSKKRKMDLHVHSPGSQLQATSTGRPFKRKSPVIDLNVVDARNPDSCELQQQDYIK NLSVSSMTKKQSMSTWLEEQWYTCPEEINGEDIGDKSNIYALGVLLFELLCHCESGEMHA AMMADLRHRILPPTFLSKYPKEAGFCLWLLHPEPSSRPTARDILKSELICEDDSVKSTAA AEEISELLLHFLSTLEVQKQKKASKLLQDIQTLEDDIKEAERRYSSNVSLVRSHGAIERR VQSSPLDEHCTTSGVLLVPSTNTDRLMSNIRQLEDAYFFMRSQINLSSSAASTRSEKIVL KDRDRCSENQNENQDMSTKGKSSDQLEVFFEGLCKFARYSKFETCGTIRSGDLLNSASVV CSLSFDPDEEHIAAAGISKKIKIFDFNAFMNESVGVHYPLVEMVNKSKLSCVCWNSYIKN YLASTDYDGVVQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLWSIN EKRSLGTIWSPANVCCVQFSSYSNHLLAFGSADYKVYCYDLRYVKTPWCTLAGHEKAVSY VKFMDSETIVSASTDNSLKLWNLNKTNSSGLSPGACSLTYKGHTNQKNFVGLSVLDGYIA CGSETNEVYSYYKSLPMPMTSYKFGSVDPISGNEYFDDNGQFVSSVCWRKKSNMLVAANS TGNMKLLKLV NT seq 3093 nt NT seq  +upstreamnt  +downstreamnt atgtggatgcctgttatggaaagagtagctgaagaaactgtggcgagtaacaacaacata caattgaaaggacgagtggatgatgttccttgtaagcttgatgctcttcatagtaatatg gtgattcaatcagaaactagaaacagtgactgtcctggaagctcagctcacaggactctt gagatgactaagccgccgcctccggaggattctgctggagctaagctttctgttgaagag ttgacattggggaactataggattgttcaagggactaataatactaatatggatagttct agggctgggaagtttgagcatctttatcgtcttgctagagggtcttctctaaggccagga gatggggatcttgattctcaacctcgtgacatggatcaaatgttgtcacgaattagacaa cagcttgctggagctccttccgaaaggcaaaacctgaaaccttttatgactaggaggagc gatcacaatcttgaagctttttctgaacgtctacgagcagctggtgagaacagtattatc aaagctccttcattgatcagtagtgaaggtgtccaattgaacgcgcctgtcaatttttct cagttgttacttaaaagagctatgaaggggaaaggcgtagtaggaaagaaccaggagtct cctcctgaatttttctctgaccaagatttaggaagcaaggaaaaacagttggatagtagc aagtcgcctactcctcaccatgtgttacccctaaaatcaagtcccaaaggaaatgggatg gtatcacatggtgatggaaatcatactaaatcttcttttggaatcagtttgagggagttt cttagatcaagttatgctaaacgagagaaaagacatggcctttgtctatttaggcagctg gtggagctggttgactcagcccattcaaaaggattattcttgctagacttgagaccatcc cttttcactttagttccatcgaagaaacttagatatattggtacttttggaaagaacgat ctagactcaggtgttgacgaagatttgaataggaggaggcctgttgttcaggaatcatct attggaggtagggattcaaagaaaagaaaaatggacttgcatgtgcattctccagggagt caacttcaggccacttccaccgggagacctttcaaaaggaaaagccctgtgattgattta aatgttgttgatgcacgtaatccagacagttgcgagcttcaacagcaagactatatcaaa aatttaagcgtgtcttcaatgacgaaaaaacagtctatgtccacatggctagaagagcaa tggtatacttgtccagaggagattaatggagaagatatcggagataaatcaaatatttat gcccttggtgttcttctgtttgagttgctatgccattgcgagtccggtgaaatgcatgct gcaatgatggcagatttacgccatcggattctcccaccaacatttctctcaaaataccca aaggaagctggattttgtctttggcttctacatcctgaaccctcgtcccgaccaacagct agagatatactgaagtcagagttgatatgtgaggatgattcagttaaatcgactgctgct gctgaggagatatctgagctcttacttcattttttgtctactctagaagtgcagaagcag aaaaaagcatctaagcttttgcaagatatccagaccttagaggatgatatcaaggaggcc gagcgaagatattcttcaaatgtatctctggtgagatctcatggagctattgaaagaagg gtgcaatcatctcccctagatgagcactgtacaacttctggcgtcttgcttgtaccaagt actaatacagacaggctgatgagtaatatccgtcaacttgaagatgcatatttcttcatg cgatcacaaatcaacttgtcgagttctgctgctagtacccgttctgaaaaaatcgtacta aaggacagggacagatgctctgaaaaccaaaatgaaaatcaggatatgagtaccaaagga aaatcttcagatcaactggaagtgtttttcgaggggttgtgcaaatttgctcggtatagc aagttcgaaacctgtgggacaataagaagtggggaccttttaaactctgcaagtgtggtc tgctcattgagttttgaccctgatgaggaacatatagcagcagctgggatatcaaagaag atcaagatttttgacttcaatgcatttatgaatgaatctgtcggtgttcattatccacta gtagagatggtcaacaaatctaaattaagctgtgtttgctggaatagctacatcaaaaac tacttggcctcgactgactacgatggtgtagttcagatttgggatgccgggactggacaa ggattttcgcagtacaccgaacaccaaaagagagcatggtcagttgatttttctccatct gacccgacaaaatttgtcagtggaagtgatgactgctcggtgaagctttggagcatcaat gagaaacgttcattaggcacaatctggagtccagcaaatgtgtgttgcgtgcaattctct tcttattccaatcacttattggcatttgggtcagctgattacaaggtctattgctatgat cttcggtatgtcaaaacaccttggtgcacattggctggtcatgagaaagcggtgagttat gttaaatttatggattcagaaaccattgtttctgcttccactgataactctctcaagctt tggaatcttaacaagacaaattcctctggtttatctcctggtgcttgttcattgacatat aaaggacatacaaatcagaagaattttgtcggattgtcggttttggacgggtacatagct tgtggttcagagaccaatgaggtatatagttactataaatccttaccgatgccaatgact tcatacaagtttggatccgtcgatcccatttctggaaacgaatactttgatgacaatgga cagtttgtgtcgagcgtctgttggaggaaaaaatcgaatatgcttgtagctgcaaactct actggaaacatgaagctactaaaacttgtttga

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