KEGG   Arabidopsis lyrata (lyrate rockcress): 9318173
Entry
9318173           CDS       T01578                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a-2
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03010  Ribosome
aly04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    9318173
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    9318173
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:aly03011]
    9318173
   04121 Ubiquitin system [BR:aly04121]
    9318173
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:aly04147]
    9318173
Ribosome [BR:aly03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    9318173
  Archaea
    9318173
Ubiquitin system [BR:aly04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   9318173
Exosome [BR:aly04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   9318173
  Exosomal proteins of colorectal cancer cells
   9318173
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Dsc3_N Plexin_RBD DUF2604 UBL_UBAC1 TBK1_ULD Ubiquitin_5 Thioredox_PDIA6_C OTU1_UBXL
Other DBs
NCBI-GeneID: 9318173
NCBI-ProteinID: XP_002880283
UniProt: D7LFZ1
LinkDB
Position
Unknown
AA seq 157 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDGSGKVQRLRKE
CPNATCGAGTFMASHFDRHYCGKCGLTYVYQKEGAQE
NT seq 474 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaaaaccctaacggggaagacgatcactctcgaggtcgagtcctct
gacaccatcgacaatgtcaaggccaagatccaagacaaggaaggtatcccaccggatcag
cagcgattgattttcgccggaaagcagctcgaagacggacgtaccttagccgattacaac
atccagaaggaatcaacgcttcaccttgtccttcgtctccgtggtggtgctaagaagagg
aagaagaagacctacaccaagcctaagaagatcaagcacaagcacaagaaggtcaagctc
gctgttctccagttctacaaggttgatggttcaggtaaggttcagcgtctgaggaaggag
tgccctaacgctacctgtggtgctgggactttcatggctagccatttcgatcgtcactac
tgtggtaagtgtggtctcacctacgtttaccagaaagaaggagctcaggaatga

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