Arabidopsis lyrata (lyrate rockcress): 9318182
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Entry
9318182 CDS
T01578
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
9318182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aly03009
]
9318182
03016 Transfer RNA biogenesis [BR:
aly03016
]
9318182
03029 Mitochondrial biogenesis [BR:
aly03029
]
9318182
Enzymes [BR:
aly01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
9318182
Ribosome biogenesis [BR:
aly03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
9318182
Transfer RNA biogenesis [BR:
aly03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
9318182
Mitochondrial biogenesis [BR:
aly03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
9318182
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
POPLD
POP1_N
POP1_C
Motif
Other DBs
NCBI-GeneID:
9318182
NCBI-ProteinID:
XP_020885513
LinkDB
All DBs
Position
Unknown
AA seq
825 aa
AA seq
DB search
MATTSNGNSKKRDGGLSSLAPRKINVQKFSEARAAELESLHSIVSERLNKDFRSKRNKRR
RTNSYNNQPAKKRYIQRQKSESLIGQVSGGGDHETKITRRVKRRMELKGNPQSGFCTSGD
GTKRLRTHVWHAKRFTMTKLWGFHLPLGLHGRGRGSRDVLKQSRQGVLLHDASYHIAVQL
EGPEGSLLSILNMLLEPSPSSHSKEVFDSILTGRSYENAMLYHLEPPVSQAIAPVTYMWR
PSQIPKRRDEEKGGDGIGTDRPVSDRDYVDFRKLWVWIHASSFTEGYAILKVACQKQMNE
TGVSVDCFSLEGQLAKLEIFGPKASHLLQKTLHPALSSSEDTSISKMCSMEKAEVKNVAD
PYKEENVSSGAILAQFVIDPRLILNSPRDDSTVSFETTKTEPTESLETTTNTEAETFPEV
FNCLWDANRELNPPEEENMLCWEKHQSRLDSLCLDDPAADVPKVSSRLRSSRSCPLLLLK
HKKLGNAPTGWSLILPVSWIKVFWNALVSKGAHAIGQREKRWVSCDDGLPFFPSDFPDCK
AYSSFTLSEAADLEEKAQRRPPAIRPFRIPIPPPWNSIHVTRSIGESSNQKLTSNGTNGV
EISSSGGNLFDGIVARTSDSLTTFLQTFTSDNLLLLPHNTSKTNLMKKLQEDDKKVRAQI
HQSSKKLCLVRVLLHAFKEGSFEEGAVVCAPTLADISLLKSSCGEGEEGRVTMPQSSVSS
YFQEQPSGSWELNVSEDTLTEQSHRWPIGFVTTGFVRGSKKPAAEAFCDAVLLGRLRDEQ
WRDKDVKRRKKQIYVLVRNLRSCAFRLALATIVLELQDSCDVHCF
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggctactacttcgaatggaaactctaagaaaagagatggtggtttatcgtcgcttgcc
cctcgcaaaatcaacgtccagaaattctcagaggctcgagcagcggagctcgaatctctt
cactccattgtgtctgaacgtttgaacaaggactttcgatcaaagaggaataagaggaga
aggaccaattcttacaataatcaacctgcaaagaagcgttatatacagaggcagaaatca
gagtcattgattggtcaagtatcaggaggaggagaccatgaaacaaagatcactagacga
gttaagagaagaatggaacttaaagggaaccctcaatctggtttttgtacttctggtgat
gggacaaagaggctgagaacacatgtttggcatgctaaacgatttacgatgactaagctt
tggggctttcaccttcctcttggtttacatggaagaggaaggggatctagggatgtcttg
aagcaatctaggcaaggtgttcttcttcatgatgcaagctatcacattgctgtgcaattg
gagggtccagagggctcactcttgtcgatattaaatatgctactagagccttctccttca
tctcattccaaggaagtttttgactctattctcacaggccgtagttatgaaaacgccatg
ctttatcatctcgaaccaccagtttctcaggcgattgctcctgtaacttatatgtggaga
ccttctcagataccaaagagaagagatgaggagaaaggaggggacggcataggaactgat
cgcccagtctcagatagagattatgtagactttcgaaaactttgggtgtggatccatgct
tcttccttcactgaaggatatgctattcttaaagtagcttgtcagaaacagatgaatgag
acaggtgtctcagttgattgcttttcactcgagggccagcttgcaaaacttgagattttt
ggtccaaaagcatctcatcttctccagaagaccctacatcctgctttaagtagctcagag
gatacctctatttctaaaatgtgttcaatggaaaaagctgaggttaaaaacgttgctgat
ccttacaaagaagagaacgtatcatctggcgctattttagcacagtttgtcatagatccg
cggttaatcctgaatagtccacgtgatgatagtacagtgtcatttgaaacaaccaaaact
gagcctactgagtcacttgaaacaacaaccaacactgaggctgaaacttttcctgaagtt
ttcaactgcttgtgggatgcaaatcgtgagctgaaccctccagaagaagagaacatgttg
tgttgggaaaagcatcaaagtcgtctggattctctttgcctcgatgacccagctgctgat
gttccaaaggtatctagtaggctaaggagttcaaggtcttgtcctttactgcttcttaaa
cataaaaaacttgggaatgcacctaccggatggtctcttatacttcccgttagttggatc
aaagtcttctggaatgccttggtctcaaaaggagctcatgcaataggtcagagggagaaa
cgctgggtttcttgtgatgatggtttgccctttttcccatcagatttcccggactgtaaa
gcgtattcatcttttacactgagcgaggctgcagacttggaagaaaaggcacaacgtcgc
cctccagccataagacctttcagaattcccattccacctccatggaatagtatccacgtc
acacgttctattggagagagttccaatcaaaagcttacaagcaatgggacgaatggagtg
gaaatttccagttctggtggtaatctatttgatggtatcgtggcaagaacatcagattcg
ctgactacttttctccaaacattcacaagtgacaacttgcttttattacctcacaacact
tcaaaaacaaaccttatgaagaagcttcaagaagatgataaaaaagtaagagctcagatc
catcagagtagtaagaaactgtgcctcgtcagagttcttttacatgctttcaaggaaggt
tctttcgaagaaggcgcggttgtatgtgcaccaactcttgcagacatatcattgctaaaa
tccagctgcggtgaaggagaagaagggcgtgttacaatgccgcaatcttctgtaagttct
tactttcaagaacaaccttctggaagctgggaactaaatgtctccgaagacactcttaca
gagcaatctcatagatggccaatcgggtttgtaacaacaggatttgtccgggggagtaaa
aagccggcggcagaagctttctgtgatgcggtgttgttagggagactaagagacgagcaa
tggagagacaaagatgtaaaacggaggaagaagcagatttatgttttagttagaaaccta
agatcttgtgcgtttagactcgcacttgctaccattgtcttggagctacaagactcttgt
gatgtccactgcttttaa
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integrated database retrieval system
