Arabidopsis lyrata (lyrate rockcress): 9318264
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Entry
9318264 CDS
T01578
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aly03041
]
9318264
Spliceosome [BR:
aly03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
9318264
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
RRM_10
DUF8400
FlgA_N
Motif
Other DBs
NCBI-GeneID:
9318264
NCBI-ProteinID:
XP_002884293
UniProt:
D7LAI7
LinkDB
All DBs
Position
Unknown
AA seq
398 aa
AA seq
DB search
MSSSGQTQFRYTQTPSKVVHLRNLPWECVEEELIDLCKRFGKIVNTKSNVGANRNQAFVE
FADLNQAISMVSYYASSSEPAQIRGKTVYIQYSNRHEIVNNQSPGDVPGNVLLVTFEGVE
SHEVSIDVIHLVFSAFGFVHKIATFEKAAGFQALVQFSDVETASAARNALDGRSIPRYLL
PEHVGSCNLRMSYSAHTDLNIKFQSHRSRDYTNPYLPVNHTAMDGSMQPALGADGKKVES
QSNVLLGLIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAIAKE
ALEGHCIYDGGYCKLRLSYSRHTDLNVKAFSDKSRDYTLPDLSLLAQKGPGVSASAPPTG
WQNPQVQTQYSGYGGSPYMYPSSDPNGASPSGHPPYYG
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagctcaggccaaacgcagttccgttatacgcagacgccgtcgaaggtggtgcac
ctgcggaatcttccatgggaatgcgtcgaagaggagctcatcgacctttgtaaacgattc
ggcaagatcgtcaataccaagagcaatgtcggcgccaatcgcaatcaagctttcgtcgaa
tttgctgacttgaatcaagctatatcaatggtttcgtattatgcttcatcttcagagccc
gcacagattcggggcaaaactgtctatattcagtactctaatcgccatgaaattgttaac
aatcagagtcctggagatgtccctggaaatgtcctcttggttacctttgaaggagtggaa
tctcacgaagtcagcatcgatgtcatccatctggtattttctgcttttggatttgtgcac
aaaattgccacttttgagaaagctgctggtttccaggcactagttcaatttagtgatgtg
gagactgcatctgcggcaaggaatgcgttggatggcagaagtatacccagatatttgctt
ccagaacatgttggttcgtgcaatttgcgaatgtcttattcagctcatactgatctcaac
atcaagtttcagtcccaccggagcagagattacacaaatccataccttccagtaaatcac
accgcaatggatgggtctatgcagcctgctttaggtgctgatggcaagaaagttgaatct
cagagcaacgtccttctcggtttgattgagaatatgcagtatgctgtcactgtggatgtt
cttcacacggtgttttctgcatatggaactgtccagaagattgctatatttgagaagaac
ggttcaacgcaagcattaattcaatactctgatataccaacagcagcaatagccaaagaa
gcactggaaggacactgcatttatgacggtggctactgtaagcttcgactatcatactct
cgtcatactgatctcaatgttaaggcttttagcgacaaaagcagagactatacactcccc
gatctaagcctacttgcacagaagggtcccggagtgtcggcttctgctccaccaacaggt
tggcagaacccgcaagtgcaaactcaatactcaggctatggtggaagcccatatatgtac
ccatcatctgatcccaatggggcttcaccctcaggtcatcctccttactatggttga
DBGET
integrated database retrieval system
