KEGG   Arabidopsis lyrata (lyrate rockcress): 9318330
Entry
9318330           CDS       T01578                                 
Name
(RefSeq) THO complex subunit 7B
  KO
K13176  THO complex subunit 7
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03013  Nucleocytoplasmic transport
aly03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    9318330
  09122 Translation
   03013 Nucleocytoplasmic transport
    9318330
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aly03019]
    9318330
   03041 Spliceosome [BR:aly03041]
    9318330
Messenger RNA biogenesis [BR:aly03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     9318330
Spliceosome [BR:aly03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    9318330
SSDB
Motif
Pfam: THOC7 DUF745 DUF7795
Other DBs
NCBI-GeneID: 9318330
NCBI-ProteinID: XP_002884347
UniProt: D7L0B2
LinkDB
Position
Unknown
AA seq 236 aa
MSVKARRISGRLETVVTKVNYAFDPVDDDKIIRNRLLTRTTTTRGEPPLKKLQKKFTSFV
LEVDKEEENYNDCGRLAKAFLQELSTFEIPLLKSQAVVEANLREKESFNEVKDETERQIM
QAKAEIEDLKKQLEESKIDRQHKEECETIRKLISAQPPRSETEKVIYELNKEIAELEAES
TASWRLLELRKKQFALLLHVVDELQNTMEDEQKSLVDEIRTGLEDQRNITEAMCVD
NT seq 711 nt   +upstreamnt  +downstreamnt
atgtcagttaaagcaaggaggatttctggtagattagagactgtagtaactaaggttaat
tatgcatttgatccggtggacgatgacaagatcataagaaaccggcttctaacccgaacc
acgaccactcgaggcgagcctccattgaagaaacttcagaagaagttcacttcttttgta
ctcgaagtggataaagaagaagagaactataacgactgcggtagacttgcaaaagctttc
ttacaggaactttcaactttcgagatcccgcttctgaagagccaagcggttgtggaagca
aatcttagggagaaagagagctttaacgaggtgaaagatgagacggaaaggcagataatg
caggcgaaagctgagattgaagatctaaagaagcagcttgaggagagtaaaatagacaga
cagcataaagaggagtgtgagacgataaggaaactgatttctgcccaaccgccgaggtca
gagacagagaaggtcatatatgaattgaacaaggagattgctgagcttgaagcagagagc
actgcaagctggagattgcttgagctaaggaagaagcagtttgctctgttgttgcatgtg
gtggatgagttgcagaacacaatggaagatgagcagaagagtttggtggacgagattcgg
acagggttggaagatcagaggaacataaccgaggccatgtgtgttgattaa

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