KEGG   Arabidopsis lyrata (lyrate rockcress): 9318470
Entry
9318470           CDS       T01578                                 
Name
(RefSeq) DNA excision repair protein ERCC-1 isoform X1
  KO
K10849  DNA excision repair protein ERCC-1
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03420  Nucleotide excision repair
aly03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    9318470
   03460 Fanconi anemia pathway
    9318470
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aly03400]
    9318470
DNA repair and recombination proteins [BR:aly03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     9318470
SSDB
Motif
Pfam: Rad10 HHH_5 HHH_2 HHH HRDC PTPLA
Other DBs
NCBI-GeneID: 9318470
NCBI-ProteinID: XP_002882403
UniProt: D7L3R7
LinkDB
Position
Unknown
AA seq 407 aa
MANEDDDGEKSRSLHQQIAKKPKTQIIIGVPSYQEVIESSQTKSTPPSLFKPSQSFSQAF
AFVKSSDVYSPPPSSSAASSSSQPPGASQVPNSSQPLQTDGASSSSTPVATGSLPSNTTQ
TRNAILVSHRQKGNPLLKHIRNVKWVFSDIIPDYVLGQSSCALYLSLRYHLLHPDYLYFR
IRELQKNFKLSVVLCHVDVEDTVKPLLEVTKTALLHDCTLLCAWSMTECARYLETIKVYE
NKPADLIQGQMDTDYLSRLNHSLTSIRHVNKSDVVTLGSTFGSLAHIIDASMEDLARCPG
IGERKVRRLYDTFHEPFKRATSSYPSVVEPTIPEAPVQKNVSSKEPVVEDEDFVEDSRKR
KKKEPEKTVKTALSAVFARYSDKLSKKKEKQKEKDATTESDAEIHQD
NT seq 1224 nt   +upstreamnt  +downstreamnt
atggcgaacgaagacgacgacggtgagaaatccagaagtcttcaccaacagattgctaaa
aaacccaaaacccagatcataattggtgtgccatcgtaccaggaagttatagaaagctca
cagacgaagtccacgcctccatctctcttcaagccttcccagagtttctctcaggcattc
gctttcgtcaaatcgtccgacgtctactctcctcctccgtcttcctccgccgcctcttct
tcttcgcagccgccgggcgcttctcaggtgcccaattcaagccaaccgcttcaaaccgat
ggtgcctcatcttcttctactcctgtagctactggctctttaccgtcaaacacaactcaa
actcgtaacgcaatcctcgttagccatagacagaaaggaaacccgcttcttaaacatatc
aggaatgtgaaatgggttttctcagatatcattccagattacgtgcttggtcaaagctct
tgcgctttgtatttaagcttgcggtatcatctgctacatccggattacctctatttccgc
attagggaactacaaaagaatttcaagctaagtgttgttctttgccatgtcgacgtggaa
gatacggtgaaaccgttgcttgaagtcacgaaaaccgctctacttcatgattgcactcta
ttgtgcgcctggagcatgacggaatgtgcccgttatttggaaacaataaaagtctatgaa
aacaaacccgcagatctcatccaaggccaaatggatacagattatctatcacggctaaac
cattctcttacaagcattcgacatgtaaacaagagcgatgtagttacacttggttctaca
ttcgggtctcttgcccatataattgatgcatccatggaagatttagcacgttgtccaggg
attggcgaacgtaaggttaggcggttgtatgatacattccacgagcctttcaagcgtgca
acttcaagctacccgtctgttgtagaaccaacaatcccagaagctccagttcagaagaat
gtgagctcaaaggaacctgttgtagaagatgaggattttgtggaggactctagaaaacgc
aagaagaaagagcccgagaaaactgtgaagaccgcgctctcagctgtttttgctcgttac
tctgataaacttagcaagaaaaaagagaagcaaaaggagaaagatgcaacaaccgagtca
gatgctgaaatccaccaagattaa

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