Arabidopsis lyrata (lyrate rockcress): 9318536
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Entry
9318536 CDS
T01578
Name
(RefSeq) probable E3 ubiquitin ligase SUD1
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
9318536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9318536
Enzymes [BR:
aly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
9318536
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
9318536
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sprouty
GspB
Motif
Other DBs
NCBI-GeneID:
9318536
NCBI-ProteinID:
XP_020888891
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MCLSSLFFCHSVGWIVLETVGGTYLSGNSPVILGYTMILSFSFAYLGILFTLGHYSFPAI
VRWFTFGVHFLTVKLPCLLWVFSVEACKNISVIEDAFVSCFKIDVLPRITGCWLEFCTSR
WIGFHFITVKLPCLLWGFSVKACKKLSFIEHAFVLCLKIGVLPWIIGWWLVICTSPLFET
TNSQRFEILSHFPGMMILRWCLGFCCLIIADSYRELIQEIIHKRAFWYLLDVTDPDYKIT
KLNFGYSLFVIAFHGVLLVILTHLPIKAITSISPSFFPLDLWVNHEKPFLGAYSIYFNLL
RYGPQWLLKHTIPAMRLIVHNWIITVSAWLQLSDFMLVILRGEDFHRTDQNVRPMMQPRR
PYDDNLMFLLYSIAEGSVVTMHEYQNAEDDNQDQRDNRFLPRIGLMLVLAALSLFLMSTA
FMALPILAGRVFSDSLSFIMLRLESNMTIFLLSGLDVISCEQSMTALALHLIIPGGEEPI
YFSNISGYVYELACFSPSGSLSSPDFLVYSSTL
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgtgcctttcctctttgttcttctgccattcagttggatggattgttttagaaactgtt
ggaggcacctatctatctggaaactcgcctgttattcttggatacacgatgattctgtca
ttttcatttgcttaccttggaatcctcttcactcttggtcattactcatttccagccata
gtccggtggtttacgtttggagttcacttcctaacagtgaaattgccgtgtctcttgtgg
gttttctcagtagaagcctgcaaaaacatatctgtcattgaggatgccttcgtctcgtgc
tttaaaattgatgttctgccccggataactggatgttggctcgaattctgcacctcccgg
tggatcggatttcacttcataacagtgaaattgccatgtctcttgtggggtttctcagta
aaagcctgcaaaaaactatctttcattgagcatgcctttgtcttgtgccttaaaattggt
gttctgccttggataattggatggtggctagtaatctgcacttcccctttgtttgaaacc
acaaattcccagagatttgagattctttcacacttcccaggcatgatgatcttacgttgg
tgtttaggattctgttgcttgataattgccgactcttatagggaacttatccaggagatc
attcataaacgagctttttggtatctcctagatgtcacagatccagactacaagatcacc
aaactaaattttggttacagcctctttgtgattgcttttcatggggtattgttggtgatt
ttgactcacttaccaattaaagccattacaagtatcagcccatccttttttcctcttgat
ttatgggttaaccatgaaaagccttttcttggtgcatactcgatttatttcaacctactg
agatacggtccgcaatggttactcaaacatactataccagctatgagactcattgttcac
aactggattatcactgttagtgcttggcttcagctgagtgatttcatgctggtaattctg
cgaggagaagactttcaccgtactgatcagaatgtgagaccaatgatgcaaccaagaagg
ccgtatgatgataatctaatgtttctattgtattccatagctgaaggctcagtggtcact
atgcatgaatatcagaatgctgaagacgataatcaagaccaaagagataacaggtttctg
ccgaggattggcttgatgttggtgttagctgctttgagtttgttcctcatgagtacagcc
ttcatggctttgccaattttggcgggaagagtattctctgactctctctctttcatcatg
ctaagattggaatcaaacatgacgatctttttgctttctggattggatgttatatcctgc
gagcaatctatgacagcacttgctttgcatttgatcatacccggaggggaagaaccgatt
tacttctcaaatatatctggatacgtatacgaattggcttgtttttctccatctggatct
ctgtcatccccggatttcttggtctactcatcgaccttatga
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