Arabidopsis lyrata (lyrate rockcress): 9318783 Help Entry 9318783           CDS       T01578                                  Name (RefSeq) clathrin heavy chain 1   KO K04646   clathrin heavy chain Organism aly  Arabidopsis lyrata (lyrate rockcress) Pathway aly04142   Lysosome biogenesis aly04144   Endocytosis aly05100   Bacterial invasion of epithelial cells Brite KEGG Orthology (KO) [BR:aly00001]  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     9318783    04142 Lysosome biogenesis     9318783  09160 Human Diseases   09171 Infectious disease: bacterial    05100 Bacterial invasion of epithelial cells     9318783  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:aly04131]     9318783   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:aly04147]     9318783 Membrane trafficking [BR:aly04131]  Endocytosis   Clathrin-mediated endocytosis    Clathrin     9318783 Exosome [BR:aly04147]  Exosomal proteins   Proteins found in most exosomes    9318783 SSDB OrthologParalogGFIT Motif Pfam:  Clathrin Clathrin_propel Clathrin_H_link Clathrin-link TPR_COPA_B Motif Other DBs NCBI-GeneID:  9318783 NCBI-ProteinID:  XP_020888200 LinkDB All DBs Position Unknown AA seq 1702 aa AA seqDB search MAAANAPIIMKEVLTLPSVGIGQQFITFTNVTMESDKYICVRETAPQNSVVIIDMNMPMQ PLRRPITADSALMNPNSRILALKAQVPGTTQDHLQIFNIEAKAKLKSHQMPEQVAFWKWI TPKMLGLVTQTSVYHWSIEGDSEPVKMFDRTANLANNQIINYKCSPNEKWLVLIGIAPGS PERPQLVKGNMQLFSVDQQRSQALEAHAASFAQFKVPGNENPSILISFASKSFNAGQITS KLHVIELGAQPGKPSFTKKQADLFFPPDFADDFPVAMQVSHKFNLIYVITKLGLLFVYDL ETASAIYRNRISPDPIFLTSEASSLGGFYAINRRGQVLLATVNEATIIPFISGQLNNLEL AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ AGQTPPLLQYFGTLLTRGKLNTYESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYMFLLQTILRTDPQ GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHAFLQTKVLE INLVTFPNVADAILANGMFSHYDRPRVAQLCEKAGLYIQSLKHYSELPDIKRVIVNTHAI EPQALVEFFGTLSSEWAMECMKDLLLVNLRGNLQIIVQACKEYCEQLGVDACIKLFEQFK SYEGLYFFLGSYLSMSEDPEIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMEA KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE DFIKGLILSVRSLLPVEPLVDECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS NNNPEHFLTTNPYYDSKVVGKYCEKRDPTLAVVAYRRGQCDEELINVTNKNSLFKLQARY VVERMDGDLWEKVLTEENEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVDAQLYE EAFAIFKKFNLNVQAVNVLLDNVRSIERAVEFAFRVEEDAVWSQVAKAQLRDGLVSDAIE SFIRADDATQFLEVIRASEDTNVYDDLVRYLLMVRQKVKEPKVDSELIYAYAKIERLGEI EEFILMPNVANLQNVGDRLYDEALYEAAKIIYAFISNWAKLAVTLVKLQQFQGAVDAARK ANSAKTWKEVCFACVDAEEFRLAQICGLNIIIQVDDLEEVSEYYQNRGCFNELISLMESG LGLERAHMGIFTELGVLYARYRYEKLMEHIKLFSTRLNIPKLIRACDEQQHWQELTYLYI QYDEFDNAATTVMNHSPEAWEHMQFKDIVAKVANVELYYKAVHFYLQEHPDIINDLLNVL ALRLDHTRVVDIMRKAGHLRLIKPYMVAVQSNNVSAVNEALNEIYVEEEDYDRLRESIDL HDSFDQIGLAQKIEKHELVEMRRVAAYIYKKAGRWKQSIALSKKDNMYKDCMETASQSGD HDLAEQLLVYFIEQGKKECFATCLFVCYDLIRPDVALELAWINNMIDFAFPYLLQFIREY SGKVDELIKDKLEAQKEVKAKEQEEKDVMSQQNMYAQLLPLALPAPPMPGMGGGGYGPPP PMGGMPGMPPMPPYGMPPMGGY NT seq 5109 nt NT seq  +upstreamnt  +downstreamnt atggcggcggctaacgcgccaatcatcatgaaggaggtcctaacgcttccgagcgttggg atcggtcaacagttcatcacctttacaaatgtcactatggagtctgataagtacatatgt gtacgagagacggcaccacagaacagtgttgtaattatcgatatgaatatgcccatgcag cctttaaggagacctataactgctgattctgctcttatgaacccaaactcgaggatcctt gccttaaaagctcaagttccaggaactactcaggatcatctacagatatttaacatcgaa gcaaaagcaaagttgaagtcacatcagatgcctgagcaggttgctttttggaagtggatc acaccaaagatgctggggctggtcacgcaaacttctgtgtatcattggtcgattgaaggt gattctgagccagttaagatgtttgatcgaacggccaatttggcaaacaatcaaattata aactataagtgctctcctaatgagaagtggttggtcttgattggaattgctcctggctct cctgagagaccacaattggtaaaaggaaatatgcagcttttctcggtggatcaacagcgg agccaggcccttgaagcacatgctgcatcatttgctcagtttaaggtccctgggaatgag aatccttctattcttatatcctttgcaagcaagagctttaatgctgggcagataacatca aagttgcatgttattgaacttggtgcccaaccaggaaaaccatcatttacaaaaaagcag gcagatctctttttccccccagattttgctgatgattttcctgtggccatgcaggtctct cacaagtttaacttgatttatgtcatcaccaagcttggcctgctgtttgtatatgatcta gagacagcttctgctatctacagaaatcggataagtccggacccaattttcttaacgtct gaagcttcctcacttgggggtttctatgccattaataggcgaggacaagttcttttggca accgtaaatgaggccaccataataccttttattagtggtcaattgaacaatttggaactt gctgtcaatcttgctaaaagaggaaacctccctggtgcagagaatctggtagtccagcgg ttccaagagttatttgctcaaacaaagtacaaggaggctgctgagcttgctgctgaatct cctcagggtattctacggacacctgatacagtggccaaattccagagtgttcctgtacaa gcagggcaaactcctccattgttacagtattttgggacccttttgactagagggaagctc aatacatatgagtctttggaactatctcggcttgttgtgaatcaaaacaagaagaacctc ttggaaaactggttagccgaggataagttagaatgcagtgaagaactcggagaccttgtc aagactgtggataatgaccttgctctaaaaatttacatcaaagctagagctactccaaaa gtcgttgcagcttttgcagagcgaagggagtttgacaaaatactgatttattcaaagcag gttgggtacacacctgattacatgtttcttctgcaaacgatacttcgtacggatcctcag ggagcagtaaattttgctttaatgatgtcccaaatggaaggaggttgtccagttgactac aacactatcactgatcttttccttcagagaaatctgatccgtgaagccactgctttcctt ctggatgttctgaagccaaacttacccgagcatgcttttctacaaactaaggttttggag atcaatttggtaacctttcctaatgtggctgatgcaatcttagcaaatgggatgttcagc cattatgacaggcctcgtgttgctcagctttgtgaaaaggctggactttacatccaatcc ttaaagcattactcggagttacctgatatcaaacgtgtaattgttaacacacatgctatt gagccacaggctcttgttgagtttttcggtactctttctagcgagtgggctatggagtgc atgaaagatctcttgttggtcaacctgagaggcaaccttcagataatcgttcaggcttgc aaggagtactgtgagcaacttggtgtcgatgcatgcattaaactctttgagcaattcaag tcatacgaagggctgtactttttcctaggttcatacttgagtatgagtgaggatcctgag attcacttcaagtacatcgaagcagctgccaagactggtcaaataaaggaggttgagcgt gtgactagagagtctaacttttatgatgctgaaaagacgaagaactttttgatggaagct aagcttcctgatgcccgacctttgataaatgtctgcgatcgttttggctttgtgcctgat cttactcattacctctacacaaacaacatgctgcgttacattgaaggttacgttcagaag gtaaatcctgggaatgctcccttagttgtggggcagttgcttgatgacgaatgccctgaa gattttataaaaggcctcattctttctgttcgttcattacttcctgttgaaccccttgtt gatgaatgtgaaaagagaaatcgactccgtctccttactcagttcttggagcatctagtt agtgagggaagccaagatgtgcatgtccataatgccttgggtaaaattatcatagacagt aacaacaaccccgagcatttcctgaccaccaatccttactacgactctaaggttgtgggt aagtactgcgagaaacgtgatcccactctggccgtggttgcatacagaagaggacaatgt gacgaggaactcatcaatgtcaccaacaagaactctttgttcaagttacaagccaggtac gtagtggagaggatggatggtgacctctgggagaaggttcttacggaagaaaatgaatat aggaggcaacttatcgaccaagttgtgtctactgctttacctgaaagcaagagcccagag caagtttctgcagctgttaaagcattcatgactgctgatctgcctcatgagcttattgag cttcttgaaaaaattgtgcttcaaaattctgccttcagtggaaatttcaatctgcaaaat ctgcttatactgacagctattaaggcagatccgtctagagttatggattacattaacagg ctggataattttgatggtccagctgttggagaagtggcggttgacgctcaattgtatgag gaagcatttgcgatttttaagaagttcaacttaaatgttcaggctgtcaacgtattgttg gataacgtcagaagcattgagcgtgctgttgagtttgctttccgggttgaagaagatgct gtttggagtcaagtcgctaaggctcagctcagggacggattagtcagtgatgctattgag tcctttatccgagctgatgatgccactcagttcctggaggtcatccgcgcctctgaagat actaatgtctatgatgacttggtgagataccttctgatggttagacagaaggtgaaggaa cccaaggtggatagtgagctcatctatgcttatgcaaagattgaaaggttgggtgagatt gaagaatttattctgatgcccaacgttgccaaccttcaaaatgttggtgaccgcttgtat gatgaagctctgtatgaggctgcaaagataatatatgcattcatatcgaattgggccaag ttagccgtcacccttgtgaagttgcaacagttccaaggtgctgttgatgctgcaaggaaa gcaaacagtgcaaagacatggaaggaagtctgctttgcttgtgttgatgctgaggaattc cgactggcccaaatctgtggacttaacattatcatacaggtggatgacctggaagaagta agcgagtactaccagaacagaggatgcttcaatgaattgatctcacttatggagagtgga cttggtctggaacgtgctcacatggggatcttcaccgagttgggtgtcctgtacgccaga tatcgttatgagaagcttatggaacacatcaagttgttctcgactcgcctcaatattccc aaacttatccgggcctgtgatgaacaacagcattggcaggaacttacctatctttacatt caatatgatgagtttgataatgctgcaaccactgtcatgaatcattctcctgaagcatgg gagcacatgcaattcaaagacattgttgccaaggttgcgaatgttgagctttactataag gccgttcacttctacttgcaagagcaccctgatataatcaacgatcttctcaatgtgctt gctctgcggttagatcacactcgtgtcgttgatattatgcgcaaggctggtcacttgcgt cttatcaagccatacatggttgcagttcagagcaataatgtctctgctgtaaatgaagct ctgaatgagatatatgtagaagaagaagactatgacaggttgcgcgagtctattgatttg catgacagttttgaccagataggtctcgcccagaagattgagaaacacgagcttgtcgaa atgagacgtgtggctgcttatatctacaagaaagctggtagatggaagcaatcgattgct ttatcaaagaaagataacatgtacaaggactgtatggaaactgcttcgcaatccggcgac catgatcttgcagaacaacttctcgtctacttcattgaacaggggaaaaaggaatgcttt gctacatgtctctttgtctgttatgacttaatccgaccagacgttgctctagaacttgct tggatcaacaatatgatagactttgccttcccgtatctcctccagtttatccgagaatac tctggcaaagtggatgagctaatcaaggacaagctggaggcacaaaaagaggtgaaggcc aaagaacaggaagagaaggatgtcatgtcccaacagaacatgtacgcccaattattgcca ttggctctacctgcccctccgatgccaggaatgggaggtggtgggtatggtccgccacca ccaatgggcggaatgccaggaatgcctccaatgccaccgtatggaatgcctccaatgggc ggctactaa

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